Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02896 ATGGGGTTTGAGAAACATATTGGTAAGTATAGGCTTGGAAGGACAATTGGAGAAGGAACATTCTCTAAGGTTAAGCTTGCTGTTAATGGAGACAATGGAGAGAAAGTTGCAATCAAAGTCATTGATAAGCATATGGTCATGGAAAACAATCTTAAGAACCAGGTCAAAAGAGAGATTAGTACAATGAAACTTCTGCATCATCCCAATATTGTCAGAATTTTCGAGGTGATTGGGACAAAAACAAAAATATACATTGTGATGGAATATGTCTCAGGAGGACAAGTACTAGACAAGATGTCCTATGAGAAGAAGCTGAATGAACATGTGGCAAGGAAACTATTCCAGCAGCTTATTGATGCCATGGACTATTGCCATAACAAAGGAGTCTATCACAGAGATCTCAAGCCAGAAAACTTGTTGCTTGACAGCAAAGGAAACCTCAAAGTGTCTGACTTTGGATTAAGTGCACTCCAAAAGCCTAATGATGTCTTAAACACACGGTGTGGCTCCCCATGTTATGTGGCACCTGAGTTGATACTGAGCAAGGGATATGATGGAGCTTCTGCTGATGTTTGGTCATGTGGGGTGATTCTTTTTGAATTACTTGCAGGCTTCTTACCATTTGATGATCACAATTTGATGAACTTATATGAGAAGATATGCAGAGCAGCATACAAATGTCCACCATGGTTTACTCAAAGTCAAAAGAAACTAATTGCCAAAATATTTGTACCACGTCCTGGAAAGAGGATAACTATTCCAGATATTATTGAAGATGAGTGGTTTCAAACAGATTATGAACCTGCTTGTGTATCTGAATGTGTTAAGAACATTAAGCTGGATGATTGTAATGTTGCATTTGATTCAGTTGAGGAGAAAATCAGAGAATCAAAGATACCAAAGTCCTCAAGTTTCATTAATGCATTTCAACTAATAGCCATGGCACAGGACCTTGATCTTTCTGGCCTTTTTGAAGAAGAACAGGATCTCAAGAAGCAGAAGACAAGGTTTGGATCCAAACACACAATCAATGAAACAACAGAAAAAATTGAAGCTGCTGCAACAGATATGAGGTTGTCAGTAGAGAAAATAAACAACTTTAAGAGATATCAAGATCTGCAGGAGATCTAA 1131 0.3802 MGFEKHIGKYRLGRTIGEGTFSKVKLAVNGDNGEKVAIKVIDKHMVMENNLKNQVKREISTMKLLHHPNIVRIFEVIGTKTKIYIVMEYVSGGQVLDKMSYEKKLNEHVARKLFQQLIDAMDYCHNKGVYHRDLKPENLLLDSKGNLKVSDFGLSALQKPNDVLNTRCGSPCYVAPELILSKGYDGASADVWSCGVILFELLAGFLPFDDHNLMNLYEKICRAAYKCPPWFTQSQKKLIAKIFVPRPGKRITIPDIIEDEWFQTDYEPACVSECVKNIKLDDCNVAFDSVEEKIRESKIPKSSSFINAFQLIAMAQDLDLSGLFEEEQDLKKQKTRFGSKHTINETTEKIEAAATDMRLSVEKINNFKRYQDLQEI 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02896 376 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 8 363 - -
Arst1g02896 376 SUPERFAMILY Protein kinase-like (PK-like) 7 301 IPR011009 -
Arst1g02896 376 SMART serkin_6 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g02896 376 Pfam Protein kinase domain 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g02896 376 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Arst1g02896 376 ProSiteProfiles NAF domain profile. 301 325 IPR018451 GO:0007165
Arst1g02896 376 ProSiteProfiles Protein kinase domain profile. 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g02896 376 FunFam Non-specific serine/threonine protein kinase 2 89 - -
Arst1g02896 376 ProSitePatterns Protein kinases ATP-binding region signature. 16 39 IPR017441 GO:0005524
Arst1g02896 376 CDD CIPK_C 307 368 - -
Arst1g02896 376 Gene3D Transferase(Phosphotransferase) domain 1 90 286 - -
Arst1g02896 376 Gene3D Phosphorylase Kinase; domain 1 2 89 - -
Arst1g02896 376 Gene3D Kinase associated domain 1, KA1 301 375 - -
Arst1g02896 376 Pfam NAF domain 304 363 IPR004041 GO:0007165
Arst1g02896 376 FunFam Non-specific serine/threonine protein kinase 3 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02896 Arst-Chr1 90702315 90705495 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g02896 4 374 CBL-interacting serine-threonine protein kinases AT2G26980 49.733 1.73e-138 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Arst1g02896 Pkinase 6.4e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02896 - - gmx:100786097 615.15