Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02890 ATGGGAAGAGCACCATGTTGTGACAAGGCCAACGTGAAGAAAGGACCTTGGTCCCCTGAAGAAGATGCTGCTCTCAAAGCCTACATAGAAAAGAATGGAACTGGAGGCAATTGGATTGCTCTTCCTCAGAAAATTGGGCTGAAGAGATGTGGAAAGAGTTGCAGGCTTAGATGGTTAAACTATTTAAGACCTAACATCAAGCATGGTGGATTTACTGAAGAAGAAGACAACATCATCTGCAGCCTTTACATTAGCATTGGAAGCAGGTGGTCCATTATTGCGGCACAGCTACCTGGAAGGACAGATAACGACATCAAGAACTACTGGAACACTAGATTGAAGAAGAAACTGCTCGGAAGGCGCAAACAATCCAGCTTCAACAGCTCCAAGGACTCCAATATTGGGATGCAAGATGACACATCATGTTCCAATAACAATAGTAATGCCCTAAGCACTTCAGCTCTTGAGAGGCTTCAACTTCATATGCAGCTTCAAAGCCTCCAAAACCCTTTCTCTTTCTACACCAACCCTGCCCTCTGGCCAAAGTTGCATCCTTTTCAAGAAAAGATGATTCACCACAATCTGCAGCAGCAGCAGCACCAATCTCATAATCTTAACAGTCATGACTCCAACTCCAATAACCCTTTAATGCAGAATACTAATAATGCTTTGCTTTCTCCTCATCATCATGTGCTGAATCAAGAAGAAGGGGAAAAGGATACCAAGAATTCAAAGGTTGATCTTTTGGAGAATCCGCTTAATAGTAATGGCTGTTCATCAGTTCTCTTCAATAACAGTAATCCATTATTGCACTCATCAAGTGATGCCATTATTGCACCAAGAGGAGATGGTGTTGAGGGAATTCAGCAGGTTTGTGCTATCCAAAGTGAGCTTGATGAGATTTTGAATCTCAATAGCAACAGAAGAATGTGTTACATTCCACAGGAGGAGGAAGAAGAGGAGGAGGATCAGATTCAACAGATGGCTGATGATGAGTTTGACTGTTTGAGAGAGATGAATAGTAATAATAATAACAATGGTAATTCAAAGGACAGTAATAGTAACTTGATTTGGTGGTCCAATGATTCTTCTGCTGATACCAAATCAGCATCCTCAAATTCTTGGGAGTCAATGTCATCCACTCCAGTTCTTCTGCCAGAAGGGATGTTCCAAGATTATGAACTAGGTTACACTTTATAG 1200 0.4158 MGRAPCCDKANVKKGPWSPEEDAALKAYIEKNGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFTEEEDNIICSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGRRKQSSFNSSKDSNIGMQDDTSCSNNNSNALSTSALERLQLHMQLQSLQNPFSFYTNPALWPKLHPFQEKMIHHNLQQQQHQSHNLNSHDSNSNNPLMQNTNNALLSPHHHVLNQEEGEKDTKNSKVDLLENPLNSNGCSSVLFNNSNPLLHSSSDAIIAPRGDGVEGIQQVCAIQSELDEILNLNSNRRMCYIPQEEEEEEEDQIQQMADDEFDCLREMNSNNNNNGNSKDSNSNLIWWSNDSSADTKSASSNSWESMSSTPVLLPEGMFQDYELGYTL 399
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02890 399 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Arst1g02890 399 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Arst1g02890 399 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Arst1g02890 399 CDD SANT 71 113 IPR001005 -
Arst1g02890 399 Gene3D - 7 68 - -
Arst1g02890 399 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Arst1g02890 399 Gene3D - 70 141 - -
Arst1g02890 399 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Arst1g02890 399 PANTHER OS09G0431300 PROTEIN 1 245 - -
Arst1g02890 399 SMART sant 13 64 IPR001005 -
Arst1g02890 399 SMART sant 67 115 IPR001005 -
Arst1g02890 399 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Arst1g02890 399 FunFam Transcription factor RAX3 7 68 - -
Arst1g02890 399 MobiDBLite consensus disorder prediction 122 147 - -
Arst1g02890 399 CDD SANT 16 62 IPR001005 -
Arst1g02890 399 FunFam Transcription factor MYB36 70 139 - -
Arst1g02890 399 MobiDBLite consensus disorder prediction 120 147 - -
Arst1g02890 399 MobiDBLite consensus disorder prediction 194 222 - -
Arst1g02890 399 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Arst1g02890 Arst-Chr1 90679184 90680955 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g02890 1 186 MYB Transcription Factor Family AT5G57620 78.075 4.36e-102 304
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst1g02890 Myb_DNA-binding 1.6e-12 CL0123
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02890 K09422 - gmx:100783440 440.654