Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02877 ATGAATAATTTCCATCCAAACACTTCTCTTCACCTGAGTCATCATCATCATCATCACTTACCTACTGCAGATGAGAATTCAATCAACCTTGACCTTCTTCTTGAGCCTTCTTCTTCTTCAACTTCTTCATCTTCACCTCTTAGTGGTGGTGCTGGTAATAATTATAATAATATGACAGAGGCAAGGGTATTCTCATGCAACTACTGCCAAAGAAAGTTCTACAGCTCTCAGGCCTTGGGAGGACACCAGAACGCTCACAAGCTCGAAAGGACGCTGGCCAAGAAGACCAGGGAGATCACTTCATCCATGCAAGATCACAGATCAAACTTCATCAATTCTACTACTACTACTACTTCACATCATGCTTTTGGTGTTCTTGAGAACCATGTCCATGGTGCTGGAGGAAGAAGAGATAACAATAGCTTCAGCTACGGCGGTTCAAAACAATTAGGTGTGGCTGCTTCTTGGTCCCGTGGTTACACTTCTACTACTTCTGAAAATGTTCATCAGGAAGATATTAGCCAACTTGACTTGTCATTAAGGCTTTGA 549 0.4226 MNNFHPNTSLHLSHHHHHHLPTADENSINLDLLLEPSSSSTSSSSPLSGGAGNNYNNMTEARVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKTREITSSMQDHRSNFINSTTTTTSHHAFGVLENHVHGAGGRRDNNSFSYGGSKQLGVAASWSRGYTSTTSENVHQEDISQLDLSLRL 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02877 182 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 13 119 IPR044246 GO:0009788
Arst1g02877 182 Gene3D Classic Zinc Finger 53 122 - -
Arst1g02877 182 ProSitePatterns Zinc finger C2H2 type domain signature. 66 86 IPR013087 -
Arst1g02877 182 FunFam Zinc finger protein 2 37 121 - -
Arst1g02877 182 SUPERFAMILY beta-beta-alpha zinc fingers 60 91 IPR036236 -
Arst1g02877 182 MobiDBLite consensus disorder prediction 1 23 - -
Arst1g02877 182 ProSiteProfiles Zinc finger C2H2 type domain profile. 64 91 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02877 Arst-Chr1 90547932 90548750 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g02877 3 182 C2H2 Transcription Factor Family AT5G57520 44.444 4.64e-29 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02877 - - aip:107620426 331.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g02877 1 90547932 90548750 Arst1g02877 1 90547932 90548750 ECH