Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02876 CTCCGCAACTGCCCCGAATTCGCCCTCGCTTTCCTTGGCGCCTCCCGCTGCGGCGCCCCCGTCACGACCGCCAACCCCTTCTACACTCCCGCCGAGCTGGCCAAGCAAGCCACCGCCACCAAAACTAAGCTCATCATAACGCAATCCGCTTACGTCGAGAAATTCAAAGAGTACCTGGAAACAAACAACAACGACGTCAAGATCATGTGCATTGATGGTTCCCCTGAAGAATCACAGGACACTAGTGTTCTGCACTTTTCCCTTCTCACAAATTCCAATGAAAACGACGAGCCTGAAGTTAACATCACCCCCGACGATCTCGTGGCGATCCCGTTCTCCTCCGGGACATCGGGGCTGCCAAAGGGGGTGATGTTAACGCACAGCAACCTGGTAACCACGGTGGCGCAACTTGTTGACGGCGAGAATCCTCATCAGTACACGCACAGCGAGGACGTTCTCCTCTGCGTGCTGCCAATGTTTCACATATACGCACTGAACTCGATCTTGTTATGTGGCATTCGAGCGGGTGCGGCGGTTCTGATCGTGCAGAAGTTTGAGATAACGACTCTGATGGAGTTGATAGAGAAGTACAGGGTGACGGTGGCGTCTCTGGTGCCGCCGATAGTGTTGGCGGTGGTGAAGAGTGGGGATACTCACAGGTATGATCTGTCTTCGATTCGTGGGGTGATATCAGGTGCCGCTCCCATGGGAATGGAGCTTCAGGAAGCTGTGAAGGCTAGGCTTCCCCATGCCACTCTCGGACAGGGCTATGGGATGACAGAAGCGGGGCCACTTGCCATAAGCTTAGCATTTGCAAAGGAACCATTCAACGTTAAATCAGGTGCATGCGGCTCCGTCGTTAGAAACGCTGAGATGAAAATCGTCGACACTGACACTGGTACTTCCCTTCCACCTAACAAACCCGGTGAAATTTGCATTCGAGGCACTAAAGTCATGAAAGGGTACCTGAATGACCGAGAGGCGACGGAGAGAACCATAGACAAAGAAGGATGGTTACACACGGGTGACATTGGTTACATTGATGATGATGATGAGCTCTTCATCGTTGATCGCTTGAAGGAGCTTATCAAATACAAAGGATACCAAGTGGCACCTGCTGAGCTGGAATCTTTGTTGATTGCCCACCCAAACATCTCTGATGCCGCTGTTGTACCGCTGAAAGATGAAGTTGCTGGAGAAGTACCAGTTGCATTTGTTGTGAGATCAAATGGTTCTAATATCACCGAGGATGAAATCAAGAAATATATTTCTAAACAGGTGGTATTTTACAAGAGAATAAACAGAGTGTTCTTCACTGAAAGTATTCCAAAAGCAGCGTCAGGTAAAATTCTGAGGAAGGTATTAACAGCAAGGCTTAACGAAGGTTTGGTGACCAATTAG 1401 0.4989 MLVLRNCPEFALAFLGASRCGAPVTTANPFYTPAELAKQATATKTKLIITQSAYVEKFKEYLETNNNDVKIMCIDGSPEESQDTSVLHFSLLTNSNENDEPEVNITPDDLVAIPFSSGTSGLPKGVMLTHSNLVTTVAQLVDGENPHQYTHSEDVLLCVLPMFHIYALNSILLCGIRAGAAVLIVQKFEITTLMELIEKYRVTVASLVPPIVLAVVKSGDTHRYDLSSIRGVISGAAPMGMELQEAVKARLPHATLGQGYGMTEAGPLAISLAFAKEPFNVKSGACGSVVRNAEMKIVDTDTGTSLPPNKPGEICIRGTKVMKGYLNDREATERTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKYKGYQVAPAELESLLIAHPNISDAAVVPLKDEVAGEVPVAFVVRSNGSNITEDEIKKYISKQVVFYKRINRVFFTESIPKAASGKILRKVLTARLNEGLVTN 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02876 469 FunFam Long-chain-fatty-acid--CoA ligase FadD 1 363 - -
Arst1g02876 469 ProSitePatterns Putative AMP-binding domain signature. 113 124 IPR020845 -
Arst1g02876 469 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 1 459 - -
Arst1g02876 469 FunFam 4-coumarate--CoA ligase 2 364 465 - -
Arst1g02876 469 Gene3D - 1 362 IPR042099 -
Arst1g02876 469 Gene3D - 363 466 IPR045851 -
Arst1g02876 469 CDD 4CL 1 458 - -
Arst1g02876 469 Pfam AMP-binding enzyme 2 368 IPR000873 -
Arst1g02876 469 SUPERFAMILY Acetyl-CoA synthetase-like 2 464 - -
Arst1g02876 469 Pfam AMP-binding enzyme C-terminal domain 377 452 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02876 Arst-Chr1 90530238 90534355 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g02876 1 430 Monolignol Biosynthesis Gene Families AT1G51680 67.512 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02876 K01904 - gmx:548034 765.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g02876 1 90530238 90534355 Arst1g02876 1 90530238 90534355 ECH