Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02875 ATGGAACCAACAAGAAACCATGATCATCATCACGGTGGTGACCATCACTTTATTTTCCGTTCCAAGCTGCCCGACATTTACATCCCAACCCACCTCCCTCTCCACACTTACTGCTTTCAGAATCTCTCCCACTTCAAGGACCGTCCTTGCCTCATCAACGCCACCACCGGCGTTACTTTCACCTACGCCGCCGTCGAACTAACCGCCAGAAAAGTCGCCGCCGGACTCAACAACCTAGGTGTTCGTCAAGGCGACGTCATCCTCCTCCTCCTCCAGAACTGCCACCAGTTTGTCTTCGCCTTCCTTGGCGCCTCCTACCGTGGTGCCATCGTCACCACCGCCAACCCCTTCTACACCCCCGCCGAGGTCGCCAAGCAGGCCACCGCCTCCGCTGCTAAGCTCATAATAACTCAGTCGTCGTTCGTGGACAAGGTAAAGGATCTGGCCAGGGACAAACACATCAAGGTCGTGTGCATCGACGCGCCGCCGCAGGGGTGCCTTGACTTCTCGGAGCTAACAGAGGCGGATGAGGGCGACATCCCTGCCGTGAAAATCTTCCCGGATGATGTAGTTGCGCTGCCGTATTCGTCCGGCACGACGGGGCTCCCAAAAGGGGTGATGCTAACACACAAAGGGTTAGTGACGAGCGTGGCTCAGCAGGTGGACGGAGAGAACCCCAATCTGTACATTCAGCACGATGATGTGGTGGTTTGCGTGCTTCCACTGTTCCACATTTACTCGCTGAATTCGGTTCTGCTGTGCGGGCTTCGAGTAGGGGCTGCAATAGTGATAATGCACAAGTTTGAGGTGGTGGGGCTGCTTCAAGTGGTTGAGAAGCACAGGGTGAGCGTTGCGCCATTAGTGCCTCCGATTGTTCTTGCGATAGTAAAGAGCCGGGAGGTGACACGCTACGACTTATCGTCCATTCGGATGGTGATGTCCGGTGCGGCCCCATTGGGTAAGGACCTTCACGATGCTTTTAGGGCCATGCTTCCTAATAAAAAGTGCATGCAGGGTTATGGGATGACGGAAGCAGGTCCAGTGCTTTCGATGTGTTTAGCGTTTGCAAAGGAACCTTTTGAGGTGAAATCATCAGGTGCGTGCGGGACCGTCGTAAGAAACGCAGAGATGAAGATTGTGGATCCTCTCACGGCTGCTTCCCTCCCCAGAAATCATGCCGGTGAGATTTGCATCAGAGGCAACCAGATTATGAAAGGTTACTTAAACGACCCTAAGGCGACAGAAGATACCATAGACAAAGAGGGATGGTTGCACACGGGTGATATAGGATATATGGACGACAACGATGAGCTATTCATCGTTGACCGCTTAAAGGAGTTGATCAAATACAAAGGATTTCAAGTGGCTCCCGCTGAGCTCGAAGCTATGTTGATTTCTCACCCTAACATTTCCGATGCAGCTGTTATAGCCATGAAAGATGAGGCAGCAGGAGAGGTTCCTGTTGCATTTGTTGTAAGATCAAACGCGTCTAAGATATCGGAGGATGAAATCAAGCTATATATCTCAAAGCAGGTTGTGTTTTACAAGAGAATCAACAAAGTTTTCTTTGTGGATTCAATCCCAAAGGCACCGTCAGGTAAGATTTTACGAAAACACCTCAGAGCAAGGCTTGCATCTGGCCTTGAAATTTAG 1653 0.5136 MEPTRNHDHHHGGDHHFIFRSKLPDIYIPTHLPLHTYCFQNLSHFKDRPCLINATTGVTFTYAAVELTARKVAAGLNNLGVRQGDVILLLLQNCHQFVFAFLGASYRGAIVTTANPFYTPAEVAKQATASAAKLIITQSSFVDKVKDLARDKHIKVVCIDAPPQGCLDFSELTEADEGDIPAVKIFPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYIQHDDVVVCVLPLFHIYSLNSVLLCGLRVGAAIVIMHKFEVVGLLQVVEKHRVSVAPLVPPIVLAIVKSREVTRYDLSSIRMVMSGAAPLGKDLHDAFRAMLPNKKCMQGYGMTEAGPVLSMCLAFAKEPFEVKSSGACGTVVRNAEMKIVDPLTAASLPRNHAGEICIRGNQIMKGYLNDPKATEDTIDKEGWLHTGDIGYMDDNDELFIVDRLKELIKYKGFQVAPAELEAMLISHPNISDAAVIAMKDEAAGEVPVAFVVRSNASKISEDEIKLYISKQVVFYKRINKVFFVDSIPKAPSGKILRKHLRARLASGLEI 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02875 550 CDD 4CL 28 540 - -
Arst1g02875 550 FunFam Long-chain-fatty-acid--CoA ligase FadD 20 445 - -
Arst1g02875 550 Pfam AMP-binding enzyme C-terminal domain 459 534 IPR025110 -
Arst1g02875 550 SUPERFAMILY Acetyl-CoA synthetase-like 15 546 - -
Arst1g02875 550 Gene3D - 10 444 IPR042099 -
Arst1g02875 550 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 17 542 - -
Arst1g02875 550 Gene3D - 445 546 IPR045851 -
Arst1g02875 550 FunFam 4-coumarate--CoA ligase 2 446 547 - -
Arst1g02875 550 Pfam AMP-binding enzyme 41 450 IPR000873 -
Arst1g02875 550 ProSitePatterns Putative AMP-binding domain signature. 193 204 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02875 Arst-Chr1 90510153 90514136 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g02875 9 512 Monolignol Biosynthesis Gene Families AT1G51680 68.226 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02875 K01904 - qsa:O6P43_022302 876.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g02875 1 90510153 90514136 Arst1g02875 1 90510153 90514136 ECH