Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02874 ATGGAACCAACAAGAAACCATGATCATCATCACGGTGGTGACCATCACTTTATTTTCCGTTCCAAGCTGCCCGACATTTACATCCCAACCCACCTCCCTCTCCACACTTACTGCTTTCAGAATCTCTCCCACTTCAAGGACCGTCCTTGCCTCATCAACGCCACCACCGGCGTTACTTTCACCTACGCCGCCGTCGAACTAACCGCCAGAAAAGTCGCCGCCGGACTCAACAACCTAGGTGTTCGTCAAGGCGACGTCATCCTCCTCCTCCTCCAGAACTGCCACCAGTTTGTCTTCGCCTTCCTTGGCGCCTCCTACCGTGGTGCCATCGTCACCACCGCCAACCCCTTCTACACCCCCGCCGAGGTCGCCAAGCAGGCCACCGCCTCCGCTGCTAAGCTCATAATAACTCAGTCGTCGTTCGTGGACAAGGTAAAGGATCTGGCCAGGGACAAACACATCAAGGTCGTGTGCATCGACGCGCCGCCGCAGGGGTGCCTTGACTTCTCGGAGCTAACAGAGGCGGATGAGGGCGACATCCCTGCCGTGAAAATCTTCCCGGATGATGTAGTTGCGCTGCCGTATTCGTCCGGCACGACGGGGCTCCCAAAAGGGGTGATGCTAACACACAAAGGGTTAGTGACGAGCGTGGCTCAGCAGGTGGACGGAGAGAACCCCAATCTGTACATTCAGCACGATGATGTGGTGGTTTGCGTGCTTCCACTGTTCCACATTTACTCGCTGAATTCGGTTCTGCTGTGCGGGCTTCGAGTAGGGGCTGCAATAGTGATAATGCACAAGTTTGAGGTGGTGGGGCTGCTTCAAGTGGTTGAGAAGCACAGGGTGAGCGTTGCGCCATTAGTGCCTCCGATTGTTCTTGCGATAGTAAAGAGCCGGGAGGTGACACGCTACGACTTATCGTCCATTCGGATGGTGATGTCCGGTGCGGCCCCATTGGGTAAGGACCTTCACGATGCTTTTAGGGCCATGCTTCCTAATAGTGTGTGCATGCAGGGTTATGGGATGACGGAAGCAGGTCCAGTGCTTTCGATGTGTTTAGCGTTTGCAAAGGAACCTTTTGAGGTGAAATCATCAGGTGCGTGCGGGACCGTCGTAAGAAACGCAGAGATGAAGATTGTGGATCCTCTCACGGCTGCTTCCCTCCCCAGAAATCATGCCGGTGAGATTTGCATCAGAGGCAACCAGATTATGAAAGGTTACTTAAACGACCCTAAGGCGACAGAAGATACCATAGACAAAGAGGGATGGTTGCACACGGGTGATATAGGATATATGGACGACAACGATGAGCTATTCATCGTTGACCGCTTAAAGGAGTTGATCAAATACAAAGGATTTCAAGTGGCTCCCGCTGAGCTCGAAGCTATGTTGATTTCTCACCCTAACATTTCCGATGCAGCTGTTATAGCGTAA 1434 0.5307 MEPTRNHDHHHGGDHHFIFRSKLPDIYIPTHLPLHTYCFQNLSHFKDRPCLINATTGVTFTYAAVELTARKVAAGLNNLGVRQGDVILLLLQNCHQFVFAFLGASYRGAIVTTANPFYTPAEVAKQATASAAKLIITQSSFVDKVKDLARDKHIKVVCIDAPPQGCLDFSELTEADEGDIPAVKIFPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYIQHDDVVVCVLPLFHIYSLNSVLLCGLRVGAAIVIMHKFEVVGLLQVVEKHRVSVAPLVPPIVLAIVKSREVTRYDLSSIRMVMSGAAPLGKDLHDAFRAMLPNSVCMQGYGMTEAGPVLSMCLAFAKEPFEVKSSGACGTVVRNAEMKIVDPLTAASLPRNHAGEICIRGNQIMKGYLNDPKATEDTIDKEGWLHTGDIGYMDDNDELFIVDRLKELIKYKGFQVAPAELEAMLISHPNISDAAVIA 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02874 477 CDD 4CL 28 476 - -
Arst1g02874 477 Pfam AMP-binding enzyme 41 450 IPR000873 -
Arst1g02874 477 Gene3D - 10 444 IPR042099 -
Arst1g02874 477 FunFam Long-chain-fatty-acid--CoA ligase FadD 20 445 - -
Arst1g02874 477 SUPERFAMILY Acetyl-CoA synthetase-like 15 477 - -
Arst1g02874 477 Gene3D - 445 477 IPR045851 -
Arst1g02874 477 ProSitePatterns Putative AMP-binding domain signature. 193 204 IPR020845 -
Arst1g02874 477 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 17 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02874 Arst-Chr1 90510150 90513157 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g02874 18 477 Monolignol Biosynthesis Gene Families AT3G21240 68.898 0.0 658
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02874 K01904 - gmx:100779668 763.066