Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02834 ATGGCGGCAATCACCCTAGAGGAGATCAAGAACGAGACTGTTGATTTGGAGCGTATTCCTATTGAGGAAGTGTTCCAGCAACTGAAATGTTCGAGAGAAGGTTTGTCATCGGACGAAGGAGCCAATCGGCTTCAAATATTTGGCCCAAACAAGCTAGAAGAGAAGAAGGAAAGCAAACTCCTCAAGTTTCTTGGGTTCATGTGGAATCCCCTGTCATGGGTCATGGAAGCTGCAGCTATCATGGCTATTGCACTTGCAAATGGTGATAGCAAGCCTCCGGATTGGCAAGATTTCGTTGGTATCATTTGCTTGTTGTTTATTAACTCCACCATCAGTTTCATTGAAGAAAACAATGCTGGAAATGCTGCTGCTGCTCTTATGGCTGGACTTGCTCCCAAGACTAAGGTCCTTAGAGGTGGAAAATGGTCTGAGGAAGAAGCAGCAATTCTGGTCCCTGGAGACATCATTAGCATCAAACTAGGTGATGAGGTTTTCTCTGGCTCAACTTGTAAACAAGGTGAAATTGAAGCCGTCGTCATTGCAACTGGTGTCCACACATTCTTTGGCAAGGCAGCACACCTTGTGGATAGCACCAACCAAGTTGGACACTTCCAGAAGGTTCTCACAGCAATTGGAAACTTCTGCATATGTTCCATTGCTGTTGGTATGTTGGCTGAGATCATAGTCATGTACCCTATTCAGCATCGCAAATATAGAGATGGAATTGACAACCTGTTGGTCCTCTTGATTGGTGGAATCCCCATTGCTATGCCAACTGTGTTGTCTGTCACAATGGCCATTGGCTCTCACAGGCTCTCTCAGCAGGGTGCTATCACCAAGCGTATGACTGCCATTGAAGAAATGGCCGGCATGGATGTCCTCTGCAGTGACAAGACTGGGACACTCACCCTGAACAAGCTGAGCGTTGACAGGAACTTGATTGAGGTTTTTGCAAAGGGTGTGGACAAGGAACATGTTATCCTTCTTGCTGCAAGGGCTTCCAGGACTGAAAACCAGGATGCAATAGATGCTGCCATTGTTGGAATGCTTGCCGACCCAAAAGAGGCAAGGGCTGGGATAAGAGAGGTGCATTTCTTGCCATTCAATCCAGTTGACAAGAGAACAGCTTTGACTTACATCGATTCTGATGGAAATTGGCACAGGGCAAGCAAAGGTGCTCCTGAGCAGATCATTGCCTTGTGTAACCTTAGGGAAGATGCTAAGAAAAGGTGCCATGCTATTATTGACAAGTTTGCAGACAGAGGGCTTCGTTCGCTCGCTGTTGCTAGACAGGAAGTTCCAGAGAGAACAAAGGAAAGTGCCGGTGGTCCATGGCAGTTTGTTGGTTTGTTGCCACTATTTGATCCCCCAAGACATGATAGTGCTGAGACTATCCGACAAGCTCTTAACCTCGGCGTAAATGTCAAGATGATTACTGGTGATCAACTTGCCATTGCTAAGGAGACCGGCCGGAGGCTTGGGATGGGAACAAATATGTATCCGTCTGCTTCCTTACTTGGTCAAGACAAGGATGCAAGTATTGCTGCACTTCCAGTGGAAGAGCTGATTGAGAAGGCTGATGGATTTGCTGGAGTATTTCCAGAGCACAAATATGAAATTGTCAAAAAGTTACAAGAGAGGAAACACATTTGTGGAATGACCGGAGATGGTGTCAATGATGCTCCTGCTTTGAAGAAGGCTGATATTGGAATTGCTGTTGCTGATGCCACTGATGCTGCAAGAAGTGCTTCTGATATTGTCTTGACTGAACCAGGATTGAGTGTTATTGTTAGTGCAGTCTTAACCAGCAGAGCTATTTTCCAAAGAATGAAGAACTATACGATCTATGCAGTATCTATCACCATCCGTATAGTGTTTGGCTTCATGCTCATTGCACTTATCTGGAAGTTCGACTTCTCGCCTTTCATGGTTTTGATCATTGCCATTCTAAATGATGGAACAATAATGACAATTTCGAAGGATCGTGTGAAGCCATCTCCCTTGCCTGATAGCTGGAAACTGCAAGAAATATTCGCCACTGGGACTGTTCTTGGAAGTTACTTGGCATTGATGACTGTCATATTCTTCTGGGCAATGAAAGAAACTAGCTTCTTCCCTGAAAAATTTGGAGTTAGACACCTTAGTCATGATGAAATGATGTCTGCTCTATATCTACAAGTCAGTATTGTTAGCCAGGCTTTGATCTTTGTAACTCGTTCACGCAGCTGGTCTTTCGTTGAACGCCCCGGATTGTTATTGGTCTCTGCTTTTATTATTGCTCAGCTGATTGCTACAATCATAGCAGTATATGCGGATTGGGGATTCGCAAAGGTGAAAGGAATTGGTTGGGGTTGGGCTGGAGTCATCTGGCTCTACAGTGTTGTCTTCTATATTCCTCTGGACTTCATGAAGTTCGCCATCCGCTACATCTTGAGCGGCAAGGCTTGGGTAAATCTGCTAGAAAACAAGACTGCCTTCACCACCAAGAAAGACTATGGTAAGGAAGAGAGGGAAGCTCAGTGGGCTCTTGCTCAGAGGACTCTGCATGGTCTTCAACCACCGGATACTTCCGGCATCTTCAATGAGAAGAATAGTTATAGGGAACTCTCCGAGATTGCCGAGCAAGCCAAGAGAAGAGCCGAAGTTGCAAGGCTTCGTGAGCTTCACACACTAAAGGGACATGTTGAGTCAGTGGTGAAGCTAAAAGGTTTGGACATTGATACAATCCAACAGCACTATACTGTCTGA 2748 0.4541 MAAITLEEIKNETVDLERIPIEEVFQQLKCSREGLSSDEGANRLQIFGPNKLEEKKESKLLKFLGFMWNPLSWVMEAAAIMAIALANGDSKPPDWQDFVGIICLLFINSTISFIEENNAGNAAAALMAGLAPKTKVLRGGKWSEEEAAILVPGDIISIKLGDXEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMLAEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLIEVFAKGVDKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQIIALCNLREDAKKRCHAIIDKFADRGLRSLAVARQEVPERTKESAGGPWQFVGLLPLFDPPRHDSAETIRQALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLQEIFATGTVLGSYLALMTVIFFWAMKETSFFPEKFGVRHLSHDEMMSALYLQVSIVSQALIFVTRSRSWSFVERPGLLLVSAFIIAQLIATIIAVYADWGFAKVKGIGWGWAGVIWLYSVVFYIPLDFMKFAIRYILSGKAWVNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPDTSGIFNEKNSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02834 916 FunFam Plasma membrane ATPase 448 603 - -
Arst1g02834 916 NCBIfam plasma-membrane proton-efflux P-type ATPase 164 771 IPR006534 GO:0008553|GO:0016020|GO:0120029
Arst1g02834 916 NCBIfam plasma-membrane proton-efflux P-type ATPase 164 771 IPR006534 GO:0008553|GO:0016020|GO:0120029
Arst1g02834 916 SUPERFAMILY Calcium ATPase, transduction domain A 132 196 IPR008250 -
Arst1g02834 916 FunFam ATPase 4 plasma membrane-type 540 780 - -
Arst1g02834 916 PRINTS P-type cation-transporting ATPase superfamily signature 555 574 - -
Arst1g02834 916 PRINTS P-type cation-transporting ATPase superfamily signature 578 590 - -
Arst1g02834 916 PRINTS P-type cation-transporting ATPase superfamily signature 296 310 - -
Arst1g02834 916 PRINTS P-type cation-transporting ATPase superfamily signature 472 482 - -
Arst1g02834 916 PRINTS P-type cation-transporting ATPase superfamily signature 450 461 - -
Arst1g02834 916 Gene3D - 184 780 - -
Arst1g02834 916 Coils Coil 867 887 - -
Arst1g02834 916 SUPERFAMILY Calcium ATPase, transmembrane domain M 15 812 IPR023298 -
Arst1g02834 916 SFLD p-type atpase 278 607 IPR044492 -
Arst1g02834 916 SFLD p-type atpase 278 607 IPR044492 -
Arst1g02834 916 Gene3D - 66 143 - -
Arst1g02834 916 PANTHER CALCIUM-TRANSPORTING ATPASE 17 848 - -
Arst1g02834 916 SFLD C1.7: P-type atpase like 278 607 - -
Arst1g02834 916 PANTHER CALCIUM-TRANSPORTING ATPASE 17 848 - -
Arst1g02834 916 SFLD C1.7: P-type atpase like 278 607 - -
Arst1g02834 916 Pfam E1-E2 ATPase 164 275 - -
Arst1g02834 916 ProSitePatterns E1-E2 ATPases phosphorylation site. 298 304 IPR018303 -
Arst1g02834 916 Pfam haloacid dehalogenase-like hydrolase 292 569 - -
Arst1g02834 916 Gene3D - 308 455 IPR023299 GO:0000166
Arst1g02834 916 SUPERFAMILY HAD-like 292 602 IPR036412 -
Arst1g02834 916 FunFam Plasma membrane ATPase 308 455 - -
Arst1g02834 916 NCBIfam HAD-IC family P-type ATPase 101 314 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst1g02834 916 NCBIfam HAD-IC family P-type ATPase 530 643 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst1g02834 916 CDD P-type_ATPase_H 34 806 IPR006534 GO:0008553|GO:0016020|GO:0120029
Arst1g02834 916 Gene3D - 293 592 IPR023214 -
Arst1g02834 916 PRINTS H+-transporting ATPase (proton pump) signature 725 746 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst1g02834 916 PRINTS H+-transporting ATPase (proton pump) signature 555 571 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst1g02834 916 PRINTS H+-transporting ATPase (proton pump) signature 527 543 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst1g02834 916 PRINTS H+-transporting ATPase (proton pump) signature 586 611 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst1g02834 916 PRINTS H+-transporting ATPase (proton pump) signature 412 430 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst1g02834 916 SMART Cation_ATPase_N_a_2 15 87 IPR004014 -
Arst1g02834 916 Pfam Cation transporter/ATPase, N-terminus 19 81 IPR004014 -
Arst1g02834 916 Gene3D - 164 183 - -
Arst1g02834 916 Gene3D - 865 916 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02834 Arst-Chr1 90130491 90136267 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g02834 5 916 Primary Pumps ATPases AT4G30190 80.714 0.0 1549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02834 K01535 - gmx:100816905 1667.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g02834 1 90130491 90136267 Arst4g01621 4 25499111 25507493 PCT