Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Arst1g02829 | ATGGGAGGTTGTAATAGAATAATTGTATTGTTGTCATTGCTCCTTGTGGCAGCAGTTGCCAGAAGCTCAGCTCAACCGCTGAGGCGTAACTTCTACAGCCAAACATGCCCCAATGTTGAGCAGTTGGTCCGCTCCGCCGTCTCGAATAAGTTCCAGCAAACCTTTGTTACTGCTCCGGCCACCCTTAGACTCTTCTTCCATGATTGCCTTGTCAGGGGTTGTGATGCATCGGTTTTGATACAATCTCCAAATAACAAAGCAGAGAAAGACCATCCAGATGATATATCACTAGCTGGTGATGGATTTGACACAGTGGTTAAAGCCAAGGCTGCAGTTGATAGCAACCCTCAGTGCCGTAACAAAGTGTCTTGTGCTGATATTCTTGCTCTTGCTACTAGGGATGTTGTCAACTTGGCAGGGGGTCCATTTTACAATGTGGAATTAGGAAGGCGTGATGGAAGAATCTCTACCATAGCCAGTGTTCAACGCCATCTTCCTCATCCTGAAAACAATTTGGATCAGCTCACTTCCTTCTTTACCTCTAATGGCCTCTCTCAGACTGATTTGGTTGCATTGTCAGGAGCACATACAATTGGATTCTCTCACTGTGGGAAGTTCTCAAATAGGATATACAATTTCAGCCCAAGAAATAGAATCGACCCATCATTGAATTTACAATATGCATTCCAGCTTAGACAAATGTGTCCACTGAAAGTTGATCCAAGAATTGCCATAAACATGGACCCAGTCACACCCCAAAAGTTTGACAACCAATACTTCAAGAACTTGCAGCAAGGAAAGGGTCTCTTCACCTCTGATCAGGTGCTCTTCACAGATCCAAGGACTAAGTCAACGGTCAACTTGTTTGCATCAAATGAAGCAGCATTTAACAATGCCTTTATTAATGCCATCACTAAGTTGGGTAGAGTTGGTGTCTTAACTGGTAATCAAGGTGAAATTAGGATTGATTGCACCAGGCCCAACTAA | 987 | 0.4377 | MGGCNRIIVLLSLLLVAAVARSSAQPLRRNFYSQTCPNVEQLVRSAVSNKFQQTFVTAPATLRLFFHDCLVRGCDASVLIQSPNNKAEKDHPDDISLAGDGFDTVVKAKAAVDSNPQCRNKVSCADILALATRDVVNLAGGPFYNVELGRRDGRISTIASVQRHLPHPENNLDQLTSFFTSNGLSQTDLVALSGAHTIGFSHCGKFSNRIYNFSPRNRIDPSLNLQYAFQLRQMCPLKVDPRIAINMDPVTPQKFDNQYFKNLQQGKGLFTSDQVLFTDPRTKSTVNLFASNEAAFNNAFINAITKLGRVGVLTGNQGEIRIDCTRPN | 328 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Arst1g02829 | 328 | FunFam | Peroxidase | 30 | 174 | - | - | |
| Arst1g02829 | 328 | Pfam | Peroxidase | 43 | 292 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Arst1g02829 | 328 | Gene3D | - | 30 | 328 | - | - | |
| Arst1g02829 | 328 | CDD | secretory_peroxidase | 27 | 326 | IPR033905 | GO:0004601|GO:0042744 | |
| Arst1g02829 | 328 | ProSiteProfiles | Plant heme peroxidase family profile. | 26 | 328 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Arst1g02829 | 328 | PRINTS | Plant peroxidase signature | 36 | 55 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Arst1g02829 | 328 | PRINTS | Plant peroxidase signature | 187 | 199 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Arst1g02829 | 328 | PRINTS | Plant peroxidase signature | 60 | 80 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Arst1g02829 | 328 | PRINTS | Plant peroxidase signature | 246 | 261 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Arst1g02829 | 328 | PRINTS | Plant peroxidase signature | 100 | 113 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Arst1g02829 | 328 | PRINTS | Plant peroxidase signature | 262 | 279 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Arst1g02829 | 328 | PRINTS | Plant peroxidase signature | 121 | 131 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Arst1g02829 | 328 | PRINTS | Plant peroxidase signature | 140 | 155 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Arst1g02829 | 328 | PRINTS | Plant peroxidase signature | 302 | 315 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Arst1g02829 | 328 | SUPERFAMILY | Heme-dependent peroxidases | 27 | 328 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
| Arst1g02829 | 328 | PRINTS | Haem peroxidase superfamily signature | 140 | 152 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Arst1g02829 | 328 | PRINTS | Haem peroxidase superfamily signature | 188 | 203 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Arst1g02829 | 328 | PRINTS | Haem peroxidase superfamily signature | 122 | 139 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Arst1g02829 | 328 | PRINTS | Haem peroxidase superfamily signature | 58 | 72 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Arst1g02829 | 328 | PRINTS | Haem peroxidase superfamily signature | 248 | 263 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Arst1g02829 | 328 | FunFam | Peroxidase | 166 | 307 | - | - | |
| Arst1g02829 | 328 | Gene3D | Peroxidase, domain 2 | 166 | 307 | - | - | |
| Arst1g02829 | 328 | PANTHER | - | 9 | 328 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Arst1g02829 | 328 | ProSitePatterns | Peroxidases active site signature. | 58 | 69 | IPR019794 | GO:0004601 | |
| Arst1g02829 | 328 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 188 | 198 | IPR019793 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Arst1g02829 | Arst-Chr1 | 90053864 | 90055662 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Arst1g02829 | 23 | 328 | Peroxidase | AT4G30170 | 75.163 | 4.19e-170 | 474 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Arst1g02829 | K00430 | - | gmx:100804620 | 528.094 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Arst5g00773 | 5 | 6724050 | 6729621 | Arst1g02829 | 1 | 90053864 | 90055662 | PCT | |
| Arst1g02829 | 1 | 90053864 | 90055662 | Arst4g01644 | 4 | 25926542 | 25928687 | PCT |