Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02792 ATGTCATCATCGTGTTTAAGTGGAGCTGGCGGAAGAACCTATGGCTTCGAATTCGAATTCGTTAAGTCAACATCTTCATCAATCACCAGAACTTCACACACTTCATCATCACCGTCTTCAACAATCTCCGAATCCAGCAACAGCCAGCTGGCAATCTCCACGCGTAAGCCCAGAACCGCTCGCAAGCGACCCAATCAAACCTACAACGAAGCCGCGGCGCTTCTCTCCACCGCATACCCCAACCTCTTCTCATCCAACACCCTCAAAAGCTTCGCCAAACCATCGCCGCAATACAGTAACGGTAATATTTCCAATACGGCGTCGTTTTTGGACGACTCGTCGGACCTGTTGTTGCCGTTCAGGGTGTTCGATACGTCGTCGTTTCTGCTCCACCAGTACAAGCCGTCGTGCTTCGCGGTGGAGCCTAAAGTGGTGAGTGTGCAGCACGAGAAGCCATGCCAGAGCCCAGGGGAGATAAGCTCCAGGGTGAATTCCTTGGAATTGGAGGACCATAACAATAACCATTGCTGCGCCGGAGAAGACGATTTCGATGCCGAATCGATGCTCGACGAGGAAATCGAGGAGGGAATTGATAGCATCATGGGGAGCGGGGTAGAATTGGAATCGTCCTCCATTGATGGAGCTTCTTCGGATAATAATCCGTGGAGTTGTTTTGGCGGGAAACTGGATTTCCGGCTAGGGTTGCGGAGGGCCGGAGTGAGGGCTCTCCGAAGCGCCGACGACGGCAATTGGTGGAATTTCCCGGCGGTTGATATCCTTCAGATATCGCCTAAGGCCGTAAACAAGCCTGCGCCGCAACAACCGGTGGCTGCGGCAGCTGAAAAGGCGAAGAAGAAGAAGAAGAAGGTGGAGAAACCGAGCGTTGAGGTGAAGAATAAGAGCGATGAATTTCCGAAGCTGAATAATATTCATGCCGCTGTTCCGAAATTGAATTCCGGATTGATGTTGAAATTGAATTACGACGGTGTCAGGGATAGTTGGTCCGACAGGGGCTCGCCGTTCGGCGACGACGGCTCAGCCTCCGACTTGCCGGGAAATGACGTCACCGCACGATTGTCACAAATCGATTTGTTATGGGAGAATGGGGGAATGAGAGAGGCTAGCGTGCTTCGCTACAAAGAAAAGCGGCGTACACGCCTCTTCTCGAAGAAGATCAGGTACCAAGTCAGGAAGGTCAACGCAGATCGACGGCCCAGAATGCAGCTTAGATATCTCATGACTTGTCTAGATGATGCGAAGCCGGAACAACAACAGTTGCCTGAGCATAACGAAATCGAAGATGGGCTTGTGTCTGCCTCATCAAAGGAATCCTCGTTAACTACTAACTCTCAGCTTGGCAAAAATCCATAA 1371 0.5135 MSSSCLSGAGGRTYGFEFEFVKSTSSSITRTSHTSSSPSSTISESSNSQLAISTRKPRTARKRPNQTYNEAAALLSTAYPNLFSSNTLKSFAKPSPQYSNGNISNTASFLDDSSDLLLPFRVFDTSSFLLHQYKPSCFAVEPKVVSVQHEKPCQSPGEISSRVNSLELEDHNNNHCCAGEDDFDAESMLDEEIEEGIDSIMGSGVELESSSIDGASSDNNPWSCFGGKLDFRLGLRRAGVRALRSADDGNWWNFPAVDILQISPKAVNKPAPQQPVAAAAEKAKKKKKKVEKPSVEVKNKSDEFPKLNNIHAAVPKLNSGLMLKLNYDGVRDSWSDRGSPFGDDGSASDLPGNDVTARLSQIDLLWENGGMREASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMQLRYLMTCLDDAKPEQQQLPEHNEIEDGLVSASSKESSLTTNSQLGKNP 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02792 456 MobiDBLite consensus disorder prediction 28 55 - -
Arst1g02792 456 MobiDBLite consensus disorder prediction 437 456 - -
Arst1g02792 456 MobiDBLite consensus disorder prediction 28 65 - -
Arst1g02792 456 ProSiteProfiles CCT domain profile. 372 414 IPR010402 GO:0005515
Arst1g02792 456 MobiDBLite consensus disorder prediction 420 456 - -
Arst1g02792 456 Pfam CCT motif 372 411 IPR010402 GO:0005515
Arst1g02792 456 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 9 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02792 Arst-Chr1 89715806 89720010 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g02792 321 412 C2C2-CO-like Transcription Factor Family AT1G25440 42.478 2.51e-17 82.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Arst1g02792 CCT 2.3e-13 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02792 - - adu:107496352 715.687