Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02772 ATGAGTTATGGAAAGGACGACATAGAAGCTCCTCGGAGCTCCGGTGACATCGACGACGGAGGCTCCTCCTCCAGTCCCTTTGATATTGCCAGAACAAAAGATGCTTCCGTTCAACGACTCAAGCGTTGGAGGCAAGCAGCGCTTGTGCTTAACGCTTCTCGCCGATTTCGCTACACCTTGGACCTGAAGAAAGAAGAAGAAAAGGAGCAAGTGCTGAGAAAGATTAGAGGGCATGTTCAAGTCATCAGAGCAGCGTATCTTTTCAAGGAGTCTGCAAAAAAATTGAATAGTGGAATCGCCCCACATCCTACAAGCACCACCGGAGAATTTCAAATTGGGCTAGAGTTACTTTCTTCAATTGCAAGGGATCATAATACTGCTACTCTGCAAGAAAAAGGAGGGGTTGAAGGGATAGCAAGTTTGTTGGAGACCAATTTAGAAAAGGGGATTCAAGGTGATGACACTGACTTGTCAAGACGGACAAAGGCTTTTGGCTCGAACAACTATCCTCGAAAGAAAGGAAGAAGTTTCTTGATGTTTGTTTGGGATGCTTGCAAGGATCTGACCTTGATTATTTTAATGGTAGCTGCTGCAGCTTCATTAGTACTGGGGATAAAATCTGAGGGTATTAAGGAAGGATGGTATGATGGTGGAAGCATTGCTTTTGCAGTTATTCTTGTTATTGTTGTTACAGCTATAAGTGATTATAAGCAGTCTCTTCAGTTTCGGGACCTAAATGAGGAGAAGAGAAACATTCGTTTGGAGGTCATTAGAGGAGGTAGAAGAGTTGAGATCTCAATCTATGATATTGTTGTTGGTGATGTCATACCCCTTAACATTGGTGACCAGGTCCCTGCTGATGGAATTTTGATCGTCGGTCACTCTCTTGCAGTTGATGAATCTAGTATGACTGGGGAGAGCAATATTGTTGAAAAGAATTCTAAGAACCCTATTCTGATATCTGGTTGTAAAGTTGCAGATGGCAATGGTCTTATGCTCGTAACGGCTGTTGGTATTAATACCGAATGGGGGCTTCTAATGGCTAACATTTCAGAAGACAATGGTGAAGAAACACCTTTGCAGGTACGCTTGAATGGTCTTGCCACCTTCATTGGTATAATTGGGCTCTCTGTGGCTGTCATCGTTCTGGTTGTGCTACTGGCCAGGTATTTCTCTGGGCATTCTAGAAACCCAGATGGAAGTGTTCAATTTACAGCTGGCAAGACTAAACTCAGTACTGCAATTGATGGAGCAATAAAGATAGTCACTGTTGCGGTCACTATTGTAGTGGTTGCAGTACCTGAAGGACTCCCTTTAGCAGTTACCTTAACACTTGCCTACTCTATGAGAAAAATGATGGCAGATAAAGCTTTGGTACGTAGGCTTTCTGCCTGTGAGACTATGGGCTCAGCCACAACTATTTGCAGTGATAAGACTGGAACATTGACTATGAATCAGATGACTGTGGTTGAGGCTATCATTGGTGGGGAGAACATTGATCCTCCTCACGAGAAGTCAAAGCTCAAACCTATACTCTGCTCGTTGCTGATTGAAGGAGTTGCACAGAACACCAATGGCAGTGTTTTTGTACCTGAGGGTAGTAACAATGTTGAGGTTTCTGGATCACCAACGGAGAAGGCAATTTTACATTGGGCTGTTCAGCTTGGGATGAATTTTAAAGCCGCTAGAGCAGAATCATCAATTATTCATGTCTTCCCATTCAATTCAGATAAAAAACGAGGCGGGGTTGCAGTACAGACGACTGAATCTGAAATCCATATACATTGGAAAGGGGCTGCTGAGATAGTCCTAGGCTGCTGTACACAGTATATGGATGTAAATGATCACTTAATAGAGATGGATGAAGGAAAGATGAACTATTTTAGAAGAGCTATTGAAGATATGGCTTCTCGTAGTCTACGGTGTGTTGCCATTGCGTATAGATTATATGAAATGGAGAAAGTTCCAACCAGTGAAGACCTTGCTCACTGGTCATTACCTGAGGATAATCTCATCTTATTGGCTATTGTTGGTCTGAAGGATCCTTGTCGACCTGGTGTGAAAGATGCGGTGAAACTTTGCCAGAAAGCTGGAGTTAAGGTAAAAATGGTCACCGGTGACAATGTCAAAACTGCAACAGCAATTGCCGTGGAATGTGGAATACTTAATTCATATTCCGAAGCTACAGAGCCATATGTCATCATTGAAGGAAAAGACTTCCGTGCGATGCAAGATGCAGAGAGATTAGAAATTGTTGAAAAGATATCAGTTATGGGACGATCGTCTCCGAATGACAAGCTTTTGCTCGTGCAAGCACTGAGGAGGAAGGAGCATGTTGTTGCTGTAACTGGAGACGGAACTAATGATGCTCCTGCCTTACATGAGGCTGATATAGGTCTTGCAATGGGGATTCAAGGTACAGAAGTTGCGAAAGAGAGCTCTGATATCATTATATTGGATGACAATTTTGCTTCAGTTGTAAAGGTTGTCAGGTGGGGGAGGTCTGTGTATGCAAATATTCAGAAATTTATCCAGTTTCAGCTTACAGTGAATATAGCAGCTCTTGTTATAAATGTTATTGCTGCATTTTCTTCCGGTGACGTACCACTAAATACAGTACAGCTTCTGTGGGTAAATCTTATCATGGATACACTTGGAGCTCTAGCCTTGGCAACTGAACCACCAACTGATCATCTAATGGATCGTGATCCAATGGGTCGAAGAGAACCTCTTATATCAAATATTATGTGGAGGAATCTGCTGATACAGGCAATTTACCAAGTGTCTGTCCTACTTATACTCAATTTCCGAGGCATTTCCATACTGAATTTGGCACACAAGTCCAGTGACCACGCACTCAAAGTGAAGGACACTTTGATATTCAATGCCTTTGTTCTCTGTCAAGTTTTTAATGAATTTAATGCCCGCAAGCCGGATGAGTTCAATATATTCAAGGGAGTCACAAGAAACTACCTCTTTATGGGGATAGTGGCATTAACTGTAGTACTTCAGATCATCATCATTGAATTTCTCGAAAAGTTCGTTAAAACAGTCAAGCTAACTTGGCAACAGTGGCTCATTTGTGTCATCATTGGATTTATCAGCTGGCCTCTTGCTGTGGTTGGAAAACTGATACCAGTACCAGAAAAGCAGCTCAGTAACTCTTTTAGGAAGTGTACTAACCGTGTTCGAAGGTGTTTTTGTCGACCAGAAAAACTGTGA 3222 0.4243 MSYGKDDIEAPRSSGDIDDGGSSSSPFDIARTKDASVQRLKRWRQAALVLNASRRFRYTLDLKKEEEKEQVLRKIRGHVQVIRAAYLFKESAKKLNSGIAPHPTSTTGEFQIGLELLSSIARDHNTATLQEKGGVEGIASLLETNLEKGIQGDDTDLSRRTKAFGSNNYPRKKGRSFLMFVWDACKDLTLIILMVAAAASLVLGIKSEGIKEGWYDGGSIAFAVILVIVVTAISDYKQSLQFRDLNEEKRNIRLEVIRGGRRVEISIYDIVVGDVIPLNIGDQVPADGILIVGHSLAVDESSMTGESNIVEKNSKNPILISGCKVADGNGLMLVTAVGINTEWGLLMANISEDNGEETPLQVRLNGLATFIGIIGLSVAVIVLVVLLARYFSGHSRNPDGSVQFTAGKTKLSTAIDGAIKIVTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTMNQMTVVEAIIGGENIDPPHEKSKLKPILCSLLIEGVAQNTNGSVFVPEGSNNVEVSGSPTEKAILHWAVQLGMNFKAARAESSIIHVFPFNSDKKRGGVAVQTTESEIHIHWKGAAEIVLGCCTQYMDVNDHLIEMDEGKMNYFRRAIEDMASRSLRCVAIAYRLYEMEKVPTSEDLAHWSLPEDNLILLAIVGLKDPCRPGVKDAVKLCQKAGVKVKMVTGDNVKTATAIAVECGILNSYSEATEPYVIIEGKDFRAMQDAERLEIVEKISVMGRSSPNDKLLLVQALRRKEHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNIAALVINVIAAFSSGDVPLNTVQLLWVNLIMDTLGALALATEPPTDHLMDRDPMGRREPLISNIMWRNLLIQAIYQVSVLLILNFRGISILNLAHKSSDHALKVKDTLIFNAFVLCQVFNEFNARKPDEFNIFKGVTRNYLFMGIVALTVVLQIIIIEFLEKFVKTVKLTWQQWLICVIIGFISWPLAVVGKLIPVPEKQLSNSFRKCTNRVRRCFCRPEKL 1073
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02772 1073 Gene3D - 183 1036 - -
Arst1g02772 1073 NCBIfam calcium-translocating P-type ATPase, PMCA-type 124 1047 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Arst1g02772 1073 NCBIfam calcium-translocating P-type ATPase, PMCA-type 124 1047 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Arst1g02772 1073 FunFam Calcium-transporting ATPase 9 plasma membrane-type 329 499 - -
Arst1g02772 1073 FunFam Calcium-transporting ATPase 35 91 - -
Arst1g02772 1073 SUPERFAMILY HAD-like 473 888 IPR036412 -
Arst1g02772 1073 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 482 679 IPR023299 GO:0000166
Arst1g02772 1073 PRINTS Sodium/potassium-transporting ATPase signature 468 489 - -
Arst1g02772 1073 PRINTS Sodium/potassium-transporting ATPase signature 218 238 - -
Arst1g02772 1073 PRINTS Sodium/potassium-transporting ATPase signature 594 612 - -
Arst1g02772 1073 PRINTS Sodium/potassium-transporting ATPase signature 855 876 - -
Arst1g02772 1073 FunFam Calcium-transporting ATPase 800 1049 - -
Arst1g02772 1073 NCBIfam HAD-IC family P-type ATPase 415 507 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst1g02772 1073 NCBIfam HAD-IC family P-type ATPase 220 389 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst1g02772 1073 NCBIfam HAD-IC family P-type ATPase 750 863 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst1g02772 1073 Gene3D - 35 90 - -
Arst1g02772 1073 FunFam Calcium-transporting ATPase 485 682 - -
Arst1g02772 1073 CDD P-type_ATPase_Ca_PMCA-like 157 916 - -
Arst1g02772 1073 PRINTS P-type cation-transporting ATPase superfamily signature 299 313 - -
Arst1g02772 1073 PRINTS P-type cation-transporting ATPase superfamily signature 675 686 - -
Arst1g02772 1073 PRINTS P-type cation-transporting ATPase superfamily signature 475 489 - -
Arst1g02772 1073 PRINTS P-type cation-transporting ATPase superfamily signature 697 707 - -
Arst1g02772 1073 PRINTS P-type cation-transporting ATPase superfamily signature 807 819 - -
Arst1g02772 1073 PRINTS P-type cation-transporting ATPase superfamily signature 783 802 - -
Arst1g02772 1073 Gene3D - 472 828 IPR023214 -
Arst1g02772 1073 Gene3D - 155 351 - -
Arst1g02772 1073 SUPERFAMILY Calcium ATPase, transduction domain A 253 347 IPR008250 -
Arst1g02772 1073 Pfam Cation transporting ATPase, C-terminus 868 1045 IPR006068 -
Arst1g02772 1073 Pfam Ca2+-ATPase N terminal autoinhibitory domain 25 67 IPR024750 GO:0005516
Arst1g02772 1073 SMART Cation_ATPase_N_a_2 129 205 IPR004014 -
Arst1g02772 1073 SFLD p-type atpase 457 835 IPR044492 -
Arst1g02772 1073 SFLD p-type atpase 457 835 IPR044492 -
Arst1g02772 1073 Pfam haloacid dehalogenase-like hydrolase 472 797 - -
Arst1g02772 1073 Pfam Cation transporter/ATPase, N-terminus 132 200 IPR004014 -
Arst1g02772 1073 FunFam Calcium-transporting ATPase 183 240 - -
Arst1g02772 1073 PANTHER CATION TRANSPORTING ATPASE 99 1048 - -
Arst1g02772 1073 PANTHER CATION TRANSPORTING ATPASE 99 1048 - -
Arst1g02772 1073 FunFam Calcium-transporting ATPase 675 828 - -
Arst1g02772 1073 SUPERFAMILY Calcium ATPase, transmembrane domain M 132 1046 IPR023298 -
Arst1g02772 1073 FunFam Calcium-transporting ATPase 230 351 - -
Arst1g02772 1073 Gene3D - 485 682 IPR023299 GO:0000166
Arst1g02772 1073 Pfam E1-E2 ATPase 253 453 - -
Arst1g02772 1073 MobiDBLite consensus disorder prediction 1 30 - -
Arst1g02772 1073 SFLD Haloacid Dehalogenase 457 835 - -
Arst1g02772 1073 SFLD Haloacid Dehalogenase 457 835 - -
Arst1g02772 1073 ProSitePatterns E1-E2 ATPases phosphorylation site. 477 483 IPR018303 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Arst1g02772 Arst-Chr1 89573227 89585138 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g02772 10 1065 Primary Pumps ATPases AT4G29900 71.617 0.0 1540
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02772 K01537 - gmx:100820121 1649.8