Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02762 ATGACTGGGCTTTCTCTTGCTCTAGTGCCAAACAAGAAGAAGAACAAGCCTCTTATGGTTTCCCTTCATCAGAAGAAATTCTGTTCTACTCATCAGAGAATCGATGATGATGGAGGACACCACCACCACCACCATCACAACAACAAGAAACTCAGGCTTACAAAGGAGCAATCAACCATGCTTGAAAACAGCTTCAACCAGCATACCACTCTTAATTCAGCCCAGAAAAAATCACTTGCTGAAGAATTGAATCTAAAGACAAGACAAATTGAAGTTTGGTTTCAGAACAGAAGAGCTAGGACGAAGCTGAAACAGACGGAGGTGGATTGTGAGTTGTTGAAGAAACGGTGCCAAAGTTTAACAGATGAGAACCGAAGGTTGAAGAAGGAGTTGGAGGAAGTAACTGCTGCACTCAAAGCTACAACAACAACATCGCCACCATCATTATACATTCAACACTCCAAAGCTTCACCGGCTACCACTCTCACTATGTGTTCTTCATGCCACAAACTGCTTATTCCAAATTCAAATTAA 534 0.4195 MTGLSLALVPNKKKNKPLMVSLHQKKFCSTHQRIDDDGGHHHHHHHNNKKLRLTKEQSTMLENSFNQHTTLNSAQKKSLAEELNLKTRQIEVWFQNRRARTKLKQTEVDCELLKKRCQSLTDENRRLKKELEEVTAALKATTTTSPPSLYIQHSKASPATTLTMCSSCHKLLIPNSN 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02762 177 ProSitePatterns 'Homeobox' domain signature. 79 102 IPR017970 GO:0000981|GO:0006355
Arst1g02762 177 Pfam Homeobox associated leucine zipper 104 138 IPR003106 GO:0006355|GO:0043565
Arst1g02762 177 Coils Coil 96 144 - -
Arst1g02762 177 ProSiteProfiles 'Homeobox' domain profile. 44 104 IPR001356 GO:0003677
Arst1g02762 177 CDD homeodomain 49 105 IPR001356 GO:0003677
Arst1g02762 177 Pfam Homeodomain 49 102 IPR001356 GO:0003677
Arst1g02762 177 SUPERFAMILY Homeodomain-like 34 105 IPR009057 -
Arst1g02762 177 SMART halz 104 147 IPR003106 GO:0006355|GO:0043565
Arst1g02762 177 Gene3D - 39 110 - -
Arst1g02762 177 SMART HOX_1 46 108 IPR001356 GO:0003677
Arst1g02762 177 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 26 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02762 Arst-Chr1 89490124 89491025 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g02762 24 170 Homeobox Transcription Factor Family AT3G60390 55.782 3.68e-47 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Arst1g02762 Homeodomain 1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02762 K09338 - lang:109339930 169.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g02762 1 89490124 89491025 Arst3g02670 3 38973914 38975804 PCT