Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02750 ATGATGCCTACTACTACCACTACTCTTCTTGATCTCAATCAAGATCTAACTCTAAGCCATGATGATGACCAAGAACACCAGCAACAACAACAACAACAACCCTCTTCTCTTTCATTTCCAATCCTACTCAACCCCCTACCTCATCAAAAGGTTGAGAAGATTGATGATGCTAATTGTAGTAGTGGATCACGGGATCATTCAGAAAAACCTAATCACGGCAGTGGAATCATCAAGCTGATTTGGAAGAATAAGAAACGAGATGAGGCAGAAGCAGAAGAAGAAGAAGAAGAAGAAGAAGAAGTGATCCCAAAGTGGATGCCTTCCAAGATGAGGATGATGCGCAAGATGATGGCATCCGATCATCATCATCAACAACAACAGGAACAAGAGATTCCTATTATTGGAACGGACGATGACAACAACAATCACAACAGTAATACCACTGCTCCTACTGTTAGGGTTTGCTCTGATTGTCACACCACTAAGACTCCTCTCTGGAGAAGTGGACCAAGAGGCCCCAAGTCACTTTGCAATGCGTGCGGTATACGACAAAGAAAGGCGAGGCGTGCCGCCATGGCTGCTGCGGCGGCAAATGGAACCACACTGGCGGCGGCTGAGGTAAACAAGTTTGGTAGAAGCAAAGAGAAGCAGCTCAAGTCCAAAACTGGCAGTAGCGAGTTGATGAAAAAGAAGCGCAATAAGCTTGGAGCTGCTGGGAGAGGGAAGCAATCTCATCATCGTCATCATCATCATCATCATGATTATTGTTTCGAGGATTTGAGATTAAGCTTATTAAGCAAGAATTTGGCTGTTCATCAAGTATTCCCTCAGGACGAGAAAGAAGCTGCGATCCTTCTCATGGCCTTATCCTATGGTCTTCTTCTTGGATGA 891 0.4467 MMPTTTTTLLDLNQDLTLSHDDDQEHQQQQQQQPSSLSFPILLNPLPHQKVEKIDDANCSSGSRDHSEKPNHGSGIIKLIWKNKKRDEAEAEEEEEEEEEVIPKWMPSKMRMMRKMMASDHHHQQQQEQEIPIIGTDDDNNNHNSNTTAPTVRVCSDCHTTKTPLWRSGPRGPKSLCNACGIRQRKARRAAMAAAAANGTTLAAAEVNKFGRSKEKQLKSKTGSSELMKKKRNKLGAAGRGKQSHHRHHHHHHDYCFEDLRLSLLSKNLAVHQVFPQDEKEAAILLMALSYGLLLG 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02750 296 CDD ZnF_GATA 154 186 IPR000679 GO:0006355|GO:0043565
Arst1g02750 296 Pfam GATA zinc finger 155 188 IPR000679 GO:0006355|GO:0043565
Arst1g02750 296 SMART GATA_3 149 201 IPR000679 GO:0006355|GO:0043565
Arst1g02750 296 PANTHER GATA TRANSCRIPTION FACTOR 22-RELATED 20 294 - -
Arst1g02750 296 MobiDBLite consensus disorder prediction 213 252 - -
Arst1g02750 296 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 149 189 - -
Arst1g02750 296 Gene3D - 146 235 IPR013088 GO:0006355|GO:0008270
Arst1g02750 296 ProSiteProfiles GATA-type zinc finger domain profile. 153 185 IPR000679 GO:0006355|GO:0043565
Arst1g02750 296 ProSitePatterns GATA-type zinc finger domain. 155 180 IPR000679 GO:0006355|GO:0043565
Arst1g02750 296 MobiDBLite consensus disorder prediction 234 252 - -
Arst1g02750 296 Coils Coil 79 102 - -
Arst1g02750 296 MobiDBLite consensus disorder prediction 56 72 - -
Arst1g02750 296 MobiDBLite consensus disorder prediction 56 75 - -
Arst1g02750 296 MobiDBLite consensus disorder prediction 20 41 - -
Arst1g02750 296 FunFam GATA transcription factor 21 149 251 - -
Arst1g02750 296 MobiDBLite consensus disorder prediction 213 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02750 Arst-Chr1 89402300 89403686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g02750 104 296 C2C2-Gata Transcription Factor Family AT4G26150 42.788 2.59e-34 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Arst1g02750 GATA 3.1e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02750 - - aip:107642994 384.03