Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02723 ATGCCGCCGCTCGCTGATTGTCGCTTCTTCAGATTCATAATCCCCAACATGGAGAATCAAATTAGATTACCGGTGGCCTTCTCCAACGTTGTACGGGATAACATGAGCAACCCCGTCGAGGTAATCACCACAAATGGTCAGTCGTGGAGCATCTCGTGGGTTGTGGAGGAGGGGCATCCGCATCAAATCGTATTCACCGGAGGCTGGCGAGCCTTTTACGAACACTACCACCTTCGAATCGGTGACTCAATGCTACTATCGTATCACCAACCGAAGTTTTTCTATGTGGCCATCCACGACACAAGATACTGCGAGATCAACTACGGAAGAAACTTGCGAAACGGAAGTCTTCCAGCAATACCCGCACATGGCAACTATACAGTCTAG 387 0.4961 MPPLADCRFFRFIIPNMENQIRLPVAFSNVVRDNMSNPVEVITTNGQSWSISWVVEEGHPHQIVFTGGWRAFYEHYHLRIGDSMLLSYHQPKFFYVAIHDTRYCEINYGRNLRNGSLPAIPAHGNYTV 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02723 128 CDD B3_DNA 8 100 IPR003340 GO:0003677
Arst1g02723 128 Gene3D - 5 104 IPR015300 -
Arst1g02723 128 ProSiteProfiles B3 DNA-binding domain profile. 6 102 IPR003340 GO:0003677
Arst1g02723 128 Pfam B3 DNA binding domain 18 100 IPR003340 GO:0003677
Arst1g02723 128 SMART B3_2 9 102 IPR003340 GO:0003677
Arst1g02723 128 PANTHER B3 DOMAIN-CONTAINING 7 110 - -
Arst1g02723 128 SUPERFAMILY DNA-binding pseudobarrel domain 9 108 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02723 Arst-Chr1 89064578 89065128 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g02723 17 108 B3 DNA Binding Superfamily AT3G18990 28.261 2.08e-08 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Arst1g02723 B3 9.4e-09 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02723 - - adu:107458212 277.33