Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02710 ATGGTTTTTCCTATCAAAACCGAGCCAATTCGCATCACAAATACCCCTGGTTCCTGCCATCTGCTCCAATCTGCTATTTCCGCTGTCTCTCTAAGCTGTTTTCGCTTAGTCTTCTACATCTCCACACTTCAATTTCAGATCCCCAACAACCGCCGCAAAATGACTCGCCAAGGAGCTTATAAAGAAAGCGATGACATGCTCATTGATGAACCAAAACTGCCTCAGCAAGGCCAAATCGCGGCCCTTCCTAATGAGTTCAACCCCAGTTATCTGAAAATATATTACAGTAAGCTGTTTCCTCATGCTGATTTATATAGATGGATGTCATACGGCAACGATGGGAAGCATCCTGCTTGTGATTCATCTTACTTGGGACGAAGGGAATTCTCGTACACCCTAGATAACGATATATTTGTGCGCTACAATACCTTCAATAGTGCCACCGAACTTGAAAACTCCATCAAAGACAAGTGCCCGTTAAAGATAGATATTGGACCCATCTACAACCTCAACCCTGCACATAGGAATGCTTATGCTGGAGATAATGTTCTCACTCCGGTTGAGAGGGAGCTGATTTTTGATATAGATATGTCAGATTATGATGATGTTAGATACTGCTGCTCAGGTGCTGATGTTTGTCTCAATTGCTGGCCATTAATGATTGTAGCTGTCAAAGTAATAGATACTTCCTTAAGAGATGACTTTGGGTTTAGACATATTCTCTGGGTATATAGTGGTCGGCGTGGTGTACATTGTTGGGTCTGTGATAGAAAGGCAAGACGGTTGACTAATGAGCAGAGAGCAGCAGTTGCGGACTATTTTCGTGTCTACAAGGGAAATGAAAATAACTATAAGAAGGTTTCCTTGATGGGTCAAGTTCTGCATCCCTTTCTGGCGAGATCATATACTGAAGTTCTCAAGGAATATTTTGAGACAAAACTGCTTACAAGTCAAAATTTACTTTCTAGCGAGGAGAGATATGAAAAGATCCTAGAGATGATTCCTGATCAATCTATTGCTTCTGAACTTCGAGGAAAGTGGCAAGAAAGTAGGCGGTCTTCTAGTGCAAAAGAAGACATTAATATTATTCGATGGGAGCAACTTAAACAGTTACTGCAAAAACATAAGGCACAAGGGGTGCGTAGGTGTGTTGAAGAGATTGTGTTCACCTATACATATCCTAGGCTTGATATGGAGGTTTCTAAACATATGAACCATTTGCTCAAAGCACCCTTCTGTGTGCACCCAAAAACAGGCCGTGTTTGTGTCCCCATCAACCCAAATAATTGTGAAGAATTTGATCCCACAACGGTGCCAACCCTTATCCAGCTTTTGGAAGAGCTGAATAGGGAGGGCTTGAGGTCTGATGTTGAAGGAGAATGGAATAAAACTTCACTTGCAAATGCCATCAAGCTCTTTAGGTCATCCTTCCTTCAGCCATTACTGAAAATTTGCAAGGAGGAAATGGAAAGCTCCTATAATGCGAAACTACAGCAGTCGAAGGATCTCCTTAGTTGGTAG 1521 0.4208 MVFPIKTEPIRITNTPGSCHLLQSAISAVSLSCFRLVFYISTLQFQIPNNRRKMTRQGAYKESDDMLIDEPKLPQQGQIAALPNEFNPSYLKIYYSKLFPHADLYRWMSYGNDGKHPACDSSYLGRREFSYTLDNDIFVRYNTFNSATELENSIKDKCPLKIDIGPIYNLNPAHRNAYAGDNVLTPVERELIFDIDMSDYDDVRYCCSGADVCLNCWPLMIVAVKVIDTSLRDDFGFRHILWVYSGRRGVHCWVCDRKARRLTNEQRAAVADYFRVYKGNENNYKKVSLMGQVLHPFLARSYTEVLKEYFETKLLTSQNLLSSEERYEKILEMIPDQSIASELRGKWQESRRSSSAKEDINIIRWEQLKQLLQKHKAQGVRRCVEEIVFTYTYPRLDMEVSKHMNHLLKAPFCVHPKTGRVCVPINPNNCEEFDPTTVPTLIQLLEELNREGLRSDVEGEWNKTSLANAIKLFRSSFLQPLLKICKEEMESSYNAKLQQSKDLLSW 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02710 506 CDD AE_Prim_S 100 435 IPR014052 GO:0003896|GO:0006269
Arst1g02710 506 PANTHER DNA PRIMASE SMALL SUBUNIT 81 490 - -
Arst1g02710 506 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 33 - -
Arst1g02710 506 FunFam DNA primase 78 487 - -
Arst1g02710 506 Gene3D DNA primase, PRIM domain 77 487 - -
Arst1g02710 506 Pfam DNA primase small subunit 193 426 IPR002755 GO:0003896|GO:0006269
Arst1g02710 506 SUPERFAMILY Prim-pol domain 86 449 - -
Arst1g02710 506 NCBIfam eukaryotic-type DNA primase catalytic subunit PriS 92 447 IPR014052 GO:0003896|GO:0006269
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02710 Arst-Chr1 88730575 88734939 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g02710 54 506 Core DNA Replication Machinery Family AT5G41880 63.537 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02710 K02684 - qsa:O6P43_034334 728.013