Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02663 ATGATGAATGGTGGAAGCAGCAGGAGCAGCAGGTTCCCATTCACACCATCACAGTGGCAAGAGCTTGAACACCAAGCACTCATCTACAAATACATGGCTTCCGGCATCTCCATCCCCCCTGATCTCCTCTTCTCCATCAAAAGAGGCTACCACCTTGACCACTCTAGGCTCTTCCCTCACCACCACCCTCCACAACACCTTGGATGGAACTATCTGCAGATGGGTCTGGGAAGAAAGATAGACCCTGAACCAGGAAGATGCAGAAGAACCGATGGAAAAAAATGGAGATGCTCAAAGGAAGCATATCCAGATTCAAAGTACTGTGAGAGGCACATGCACAGAGGCAAGAACCGTTCAAGAAAGCCTGTGGAACAACAACAACCTTTGAAACAATCACCAGCAGCAGCACCAACGAACACCGATGATGCTGCTGCTTCTTCTCATCATGCTCCATCTTCTTCAACCACAACAACAATCTTATCAATCACCAACAACAATAACTCTCTCTCTCCTCTCTCATCTGCATCACTGTCCTCTCATCATGACCTTTATCATCAACACCAACACCAACACTCCTTCCTCTACCACCACCAACCCTCTTCAAGGTCCTCCAACTCCATTGGCTTCTCTTTTCAGGACAACAACGCTGCTCCTTTGTTTCTTGACACCCAGACCAACACCGACTGCAGAGAGAGGTATATTTATGGGCTGAAAGAGGAGGTGGATGAGCATGCTTTCTTCACTGAACCTTCGGGAACAATGAGAAGCTTCTCTGCTTCGTCCATGGATGATTCATGGCAGCTGACACCACTCACCATAAGCTCCTCAACTTCTTCGAAGCAGAGGAGCTGCTCTGGCTTGTCCAATGAAAACAACAACGAGTACTCTTACTTGCAGCTTCACCACCATAGCTTCAACGCTGATCATAACAACAACAACTCAAAGCAAAGAGAAGCAGAACAAGATCATCATCAGCAGGGTGGTGGTTGCTACATGGCTCTTGGGAAAGAAGAAGAGCCACATCATCAGAAGACCACCGTTCATCGTTTCTTCGATGAATGGCCTCACAAGAGTAGAGGAGGCTCATCCTGGCTTGATTTGGATGATAAATCTTCCACTACTCAGCTTTCCATTTCCATCCCCACATCCTCTCATGACTTCACAACCTTCACTTCAAGGAACACTAGAGATGGTTAA 1197 0.472 MMNGGSSRSSRFPFTPSQWQELEHQALIYKYMASGISIPPDLLFSIKRGYHLDHSRLFPHHHPPQHLGWNYLQMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEQQQPLKQSPAAAPTNTDDAAASSHHAPSSSTTTTILSITNNNNSLSPLSSASLSSHHDLYHQHQHQHSFLYHHQPSSRSSNSIGFSFQDNNAAPLFLDTQTNTDCRERYIYGLKEEVDEHAFFTEPSGTMRSFSASSMDDSWQLTPLTISSSTSSKQRSCSGLSNENNNEYSYLQLHHHSFNADHNNNNSKQREAEQDHHQQGGGCYMALGKEEEPHHQKTTVHRFFDEWPHKSRGGSSWLDLDDKSSTTQLSISIPTSSHDFTTFTSRNTRDG 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02663 398 MobiDBLite consensus disorder prediction 305 331 - -
Arst1g02663 398 Pfam QLQ 13 46 IPR014978 GO:0005524|GO:0005634|GO:0006355
Arst1g02663 398 MobiDBLite consensus disorder prediction 108 162 - -
Arst1g02663 398 Pfam WRC 82 124 IPR014977 -
Arst1g02663 398 ProSiteProfiles WRC domain profile. 81 125 IPR014977 -
Arst1g02663 398 SMART QLQ_2 12 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
Arst1g02663 398 PANTHER GROWTH-REGULATING FACTOR 5 12 275 IPR031137 GO:0005634|GO:0006351|GO:0032502
Arst1g02663 398 ProSiteProfiles QLQ domain profile. 13 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
Arst1g02663 398 MobiDBLite consensus disorder prediction 122 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02663 Arst-Chr1 88434049 88436046 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g02663 2 127 GRF Transcription Factor Family AT3G13960 66.923 6.08e-55 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Arst1g02663 WRC 8.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02663 - - gmx:100783524 466.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g02663 1 88434049 88436046 Arst1g02663 1 88434049 88436046 ECH
Arst1g02663 1 88434049 88436046 Arst3g02995 3 46400542 46403964 PCT