Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02629 ATGTCCAGCTCATCGGAGTATTCTGGAGTTTCCGGCCAAAATCCGGTGAAGTCGCCGGAGATCTCCACGTTTTCCCAGACTTGTAATCGGTTGAGCCAATACCTCAGAGAAAACGGTTCCTTCGGTGACCTCACCCTCGGCATAACAAAACGCAACCCCGCCCCTGAAACACACGGGTCACCTGAGAACTCATGCTATTCTGCAACAACCATGGAGTTATTTCCCACAAAGGAGAACAATAATGTGACAACCATGGATCTTCTTTATCCACGTGCTCCTGCTTATGCAAACACAAGGTATGCGTGTTTCTTGTTGCTTTTCATGCACCGCACCGTTTCTTTTCTGCGTTTAACAAAAGCGGAGGAGATTCTGTCCTTGGCTAAAAGAGGGAACTCTTGTGCATGCGCTTCTACGCAGCCCACCCGGCCTTACTTGTTTCAACCCCACTCCCAGCTACAGTCCGCACCTGTTGTTGGTGATCTACCTATTGCAAGGAAGGCTTCGCTGCATCGCTTCCTGGAGAAGAGAAAGGATAGAATTGCTTCAAAAGCACCATATCAAAGCAGCAGCCCCGTCTCGGTCCCTAATAAAGCAGCTGAGTCGTCTATGGCATGGCTTGGGTTAGGAGCTTAA 633 0.4945 MSSSSEYSGVSGQNPVKSPEISTFSQTCNRLSQYLRENGSFGDLTLGITKRNPAPETHGSPENSCYSATTMELFPTKENNNVTTMDLLYPRAPAYANTRYACFLLLFMHRTVSFLRLTKAEEILSLAKRGNSCACASTQPTRPYLFQPHSQLQSAPVVGDLPIARKASLHRFLEKRKDRIASKAPYQSSSPVSVPNKAAESSMAWLGLGA 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02629 210 Pfam Jas motif 162 187 IPR018467 -
Arst1g02629 210 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 22 194 IPR040390 -
Arst1g02629 210 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02629 Arst-Chr1 88172850 88174252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g02629 1 210 Tify Gene Family AT1G19180 35.686 2.06e-35 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Arst1g02629 Jas_motif 1.5e-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02629 K13464 - gmx:100527510 185.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g02629 1 88172850 88174252 Arst1g02629 1 88172850 88174252 ECH
Arst1g02629 1 88172850 88174252 Arst3g03065 3 50482368 50485052 PCT