Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02592 ATGGCTTCTTCTACGTCTTCTAAAGCCTCCCTTTTTCTCTTAGCAACAATCTTATTCTTCTCAAATGCTTGTGCTATCAGCAACCCCTCCAATGCAGAAAACCTCAATGCATTGAAATCCTTTTGCAGAACCACACCATACCCTGAAGTTTGCTTCAACTCATTGAAGCTATCAATCTCTATAACCATATCTCCAAGCATACTCAACAACCTCCTTCAGTCTCTCCAAGTAGCTATATCAGAAGCCACAAAGCTATCTGATCTTTTCAACAATGCTGGAAACTCAAACAGCATCATAGAGAATAAAATAGGAGCAGTTCAAGACTGCAAGGAGCTCCACAAACTCACATTGTCTTCTCTGAAACGCTCTCTATCCGCAATCCGTTCGCAGAACTCGAAGGACTTGGTTGATGCAAGAACATACCTTAGTGCAGCGTTAACCAACAAAGAAACGTGTTTAGAAAGCATGGAGTCAGCTTCTGGTACCCTTAAGCCAACTCTTGTGGATTCTGTGACCAACACTTTCAAATATGTCAGCAACACTCTCTCAATGCTCCCTCGTAAGCCTGATATGAAGAAGAAGCAGAAGAAGAGCACTCCAAAGTGGTTTTTTTCAAAATCAGATGATGAAGGGTATGATCCTAGTGAAGTGATTGTTGTGGCTGCAGATGGGAGTGGGAACTTTAGCACTATCAATGAAGCTGTTGACTTTGCTCCAAGTAATAGCTTTGACAGGACAGTGATATATGTGAAAGAAGGGTTATACGAGGAGAATGTGGAGATTCCAAGTCATAAGACCAATATTGTTTTGCTTGGAGATGGAAGAGATGCCACTGTCATCACTGGTAACAGAAGTTTTGTTGATGGCTGGACTACTTTTAGATCTGCCACTCTAGCTGTGTCTGGGGATGGTTTTCTGGCTCGAGACATAGCAATTGAGAACAAAGCGGGGCCAGAGAAGCATCAAGCAGTTGCACTGAGAGTTAATGCAGACTTGACTGCATTCTACAGATGTTCAATCTATGGCTATCAAGACACACTCTACACTCACTCCTTCAGACAATTCTACAGAGAAAGCGACATATATGGCACCATAGACTTCATATTCGGAAACGCGGCAGCGATCTTTCAAGGCTGCAACATTGTTTCACTAATGCCAATACCCGGCCAGTTTACGGTTATCACCGCGCAATCACGAAGTAGCCCTGATGAGGACACAGGGATCTCAATCCAGAACAGTTCAATTGTAGCAAGCACTGATTTGAGTTCAAATTCGACGATGGTCAAGAGTTACCTTGGGAGGCCATGGAGGGTGTATTCTCGCACTCTGTACATAGAGTCGTACATTGATAAGTTCATTGACCCGTTGGGATGGACAAAGTGGAACAATAATAATGATGGTGATACTGAAGGGCTTGAGACTCTGTATTATGGAGAGTATGAGAATTATGGGGGTGGTTCAGACACTCGTAACCGTGTTGATTGGCCAGGATTCCATTTGTTGGATTACAATGATGCTTATAACTTCACTGTTTCGGAGTTCATTGCAGGTGATGCTTGGCTTGGTTCTACTTCTTTTCCGTATGATGATGGGATTTGA 1599 0.4303 MASSTSSKASLFLLATILFFSNACAISNPSNAENLNALKSFCRTTPYPEVCFNSLKLSISITISPSILNNLLQSLQVAISEATKLSDLFNNAGNSNSIIENKIGAVQDCKELHKLTLSSLKRSLSAIRSQNSKDLVDARTYLSAALTNKETCLESMESASGTLKPTLVDSVTNTFKYVSNTLSMLPRKPDMKKKQKKSTPKWFFSKSDDEGYDPSEVIVVAADGSGNFSTINEAVDFAPSNSFDRTVIYVKEGLYEENVEIPSHKTNIVLLGDGRDATVITGNRSFVDGWTTFRSATLAVSGDGFLARDIAIENKAGPEKHQAVALRVNADLTAFYRCSIYGYQDTLYTHSFRQFYRESDIYGTIDFIFGNAAAIFQGCNIVSLMPIPGQFTVITAQSRSSPDEDTGISIQNSSIVASTDLSSNSTMVKSYLGRPWRVYSRTLYIESYIDKFIDPLGWTKWNNNNDGDTEGLETLYYGEYENYGGGSDTRNRVDWPGFHLLDYNDAYNFTVSEFIAGDAWLGSTSFPYDDGI 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02592 532 NCBIfam pectinesterase inhibitor domain 12 184 IPR006501 GO:0004857
Arst1g02592 532 FunFam Pectinesterase 34 187 - -
Arst1g02592 532 SMART PMEI_2 33 184 IPR006501 GO:0004857
Arst1g02592 532 Pfam Plant invertase/pectin methylesterase inhibitor 37 184 IPR006501 GO:0004857
Arst1g02592 532 Pfam Pectinesterase 218 518 IPR000070 GO:0030599|GO:0042545
Arst1g02592 532 Gene3D - 213 532 IPR012334 -
Arst1g02592 532 ProSitePatterns Pectinesterase signature 2. 361 370 IPR033131 -
Arst1g02592 532 SUPERFAMILY Pectin lyase-like 214 529 IPR011050 -
Arst1g02592 532 FunFam Pectinesterase 212 532 - -
Arst1g02592 532 CDD PMEI-like_3 40 184 - -
Arst1g02592 532 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 187 IPR035513 -
Arst1g02592 532 PANTHER PECTINESTERASE 17 522 - -
Arst1g02592 532 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 185 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02592 Arst-Chr1 87725097 87727329 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g02592 29 532 Carbohydrate Esterase AT2G26440 64.259 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02592 - - gmx:102665651 722.235