Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02571 ATGGCATCATCTGCTTCCACTTCAAGGCACTCTGTTCCCCAATCTCGCAAGCAAAAGGCCCTCGGTCTCCTATGCACTAATTTCCTGAGCTTGTATAATAGACACGACGTCCAATTCATCGGCCTCGACGATGCCGCCGCCCGATTAGGTGTTGAGAGAAGACGGATCTATGATATCGTCAATATTCTCGAGAGCATCGGGGTGCTTGCAAGAAAGGCCAAAAATCAATATACATGGAAAGGCTTTGGAGCAATTCCTGGAGCTTTTCATGAACTCAAGGAAGAGGGATTACGGGAGAATACATATGCTTTTGAAGGCGGAAATGACAACCTAAAAGGGTCTGATGACGAGGATGATGAAGAAGCATTTTCTAATCCTGGGACCGGGAGTCAAAATGAAAAGTCCAATTCCAATTCAAATTCAAACTCTACAACACTTTCAAAATCTCTCAAAAATGATAATCGAAGGGAAAAATCTCTGGCGCTGCTTACTCAGAATTTTGTAAAGCTATTTGTTTGCTCTAATATAGAAATGATCTCCCTTGACGAGGCTGCGAATTTGTTGCTTGGAGATGGCCACAGTTCATCATTAATGAGAACAAAAGTAAGACGCCTATATGATATTGCAAATGTGTTGTCCTCCATGAACCTTATCGAGAAGACCCATACCACAGATACAAGAAAACCAGCATTCAGGTGGCTGGGTTTGAGAGGGAAGGCACCTAACGAGTCCATTCAAAATTGTTCAAATCCAAACGAGTCTAGGAAAAGAGCGTTTGGAAGTGATGTCACAAACATCAGTTTTGAGAGGAACATAGTGGAACTAGGGGACTTTGCCTCTAAGAAGCTCAAAAAACTGGACAATGGTAGTGACATAGGTCAAGCAAATAGTTTTCAACAAGCTTCAAAGGGTTTTCAGTTTGGTCCTTTTGCACCCTCTTATGTGCCCAAAGTTGAAATACCCGAGAATAATAGTGTGAAGAAGTTTCATGATTGGGACAGTCTAGCAATTAAACATCGTCCACAATACCAAAACCAAGCTTTAAGAGAACTATTCTCCCATTACATGGAAGCATGGAAATCGTGGTATTCAGAAGTTGTTGGGAAGAATCCAATGCAGATTTAA 1125 0.4178 MASSASTSRHSVPQSRKQKALGLLCTNFLSLYNRHDVQFIGLDDAAARLGVERRRIYDIVNILESIGVLARKAKNQYTWKGFGAIPGAFHELKEEGLRENTYAFEGGNDNLKGSDDEDDEEAFSNPGTGSQNEKSNSNSNSNSTTLSKSLKNDNRREKSLALLTQNFVKLFVCSNIEMISLDEAANLLLGDGHSSSLMRTKVRRLYDIANVLSSMNLIEKTHTTDTRKPAFRWLGLRGKAPNESIQNCSNPNESRKRAFGSDVTNISFERNIVELGDFASKKLKKLDNGSDIGQANSFQQASKGFQFGPFAPSYVPKVEIPENNSVKKFHDWDSLAIKHRPQYQNQALRELFSHYMEAWKSWYSEVVGKNPMQI 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02571 374 PANTHER TRANSCRIPTION FACTOR E2F 11 344 IPR015633 GO:0000978|GO:0006357
Arst1g02571 374 MobiDBLite consensus disorder prediction 124 149 - -
Arst1g02571 374 Pfam E2F/DP family winged-helix DNA-binding domain 157 235 IPR003316 GO:0005667|GO:0006355
Arst1g02571 374 Pfam E2F/DP family winged-helix DNA-binding domain 17 81 IPR003316 GO:0005667|GO:0006355
Arst1g02571 374 SUPERFAMILY "Winged helix" DNA-binding domain 15 79 IPR036390 -
Arst1g02571 374 FunFam E2F transcription factor 8 11 83 - -
Arst1g02571 374 Gene3D - 150 237 IPR036388 -
Arst1g02571 374 Gene3D - 12 84 IPR036388 -
Arst1g02571 374 FunFam E2F transcription factor-like E2FE 150 237 - -
Arst1g02571 374 MobiDBLite consensus disorder prediction 103 152 - -
Arst1g02571 374 SMART E2F_TDP_2 16 81 IPR003316 GO:0005667|GO:0006355
Arst1g02571 374 SMART E2F_TDP_2 155 235 IPR003316 GO:0005667|GO:0006355
Arst1g02571 374 SUPERFAMILY "Winged helix" DNA-binding domain 157 236 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02571 Arst-Chr1 87165939 87169406 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g02571 15 372 E2F-DP Transcription Factor Family AT3G48160 55.795 1.23e-128 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Arst1g02571 E2F_TDP 1.8e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02571 K09391 - gmx:100806151 499.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g02571 1 87165939 87169406 Arst1g02571 1 87165939 87169406 ECH