Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02564 ATGCAAGGTCATAGTCATTCTTTCTTTCTTTCTTTCTCTTTGTCTTTTGCATCCATTCATTCCTTCTCCATCATATCCACTCAATGCTCTCGATTGCCTTCCCCGGCCCTCTCCCACTCTATTACTATATACTATCACCTTTTTTCCCACTTATTAAATTATCATCATCTTTCACCCTACTCTCTCTATCTCTCTCTTCCAGTTAGGGTTTCACTCCTCAACAAATCTGAGAGAAGCTTATCCCATTATTGCTGTTTTTGTCACGGAGGAAGAAGAAGGAAAAAAAAAAAAAAAAAAAATAAGGTTGTGAAAACCTTATCATCCAACAAGGGAAAGGGAATAAAGAAAAAAAAGGGAATCAAGAAGGAGATGGCATCATCAAGCTCGTACAATTCACCTTGCGCTGCCTGCAAATTCTTGAGGAGGAAGTGCATGCCAGGGTGTATCTTTGCGCCTTATTTTCCACCCGAAGAGCCTCAAAAGTTTGCAAACGTGCACAAGATCTTCGGTGCAAGCAATGTTACCAAGCTCCTCAACGAGCTTCTGCCTCATCAAAGGGAGGATGCGGTCAACTCCCTCGCTTATGAGGCAGAAGCTCGCGTGAGAGATCCTGTTTACGGCTGCGTTGGCGCCATATCATTCCTCCAAAGACAAGTCCAAAGACTTCAGAAAGAACTTGATGCCGCCAACGCCGATCTTCTCCGCTATTCCTTTACTGACATCGCTCCGACGCCGGCTCTTTCTATGCCTCCCGGACTAACCAATGCTACTTCCCTTCAACAAATTCCCCAAAGGTTTGGGGCAAGATTTGATAACGAAGGAAGTGGATTCTATAACAATAATCGCCAATATTCACCTAATATTTATTCTTACCCTTACTCTCTTCCCTGGACCGATACCTCTTCCAAGGATATCAGCGATGGGGGCGGGTTAGGTGACGGCGATGGGAGAGGAGGTAATTTGTGA 966 0.4441 MQGHSHSFFLSFSLSFASIHSFSIISTQCSRLPSPALSHSITIYYHLFSHLLNYHHLSPYSLYLSLPVRVSLLNKSERSLSHYCCFCHGGRRRKKKKKKNKVVKTLSSNKGKGIKKKKGIKKEMASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLLRYSFTDIAPTPALSMPPGLTNATSLQQIPQRFGARFDNEGSGFYNNNRQYSPNIYSYPYSLPWTDTSSKDISDGGGLGDGDGRGGNL 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02564 321 Pfam Lateral organ boundaries (LOB) domain 133 230 IPR004883 -
Arst1g02564 321 Coils Coil 212 232 - -
Arst1g02564 321 ProSiteProfiles LOB domain profile. 132 233 IPR004883 -
Arst1g02564 321 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 131 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02564 Arst-Chr1 86456938 86459263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g02564 124 242 AS2 family AT5G63090 90.833 4.60e-74 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Arst1g02564 LOB 9.8e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02564 - - ahf:112722314 401.749