Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02529 ATGCCGCCGCTCGCTGATTGTCGCTTCTTCAGATTCATAATCCCCAACATGGAGAATCAATTTAGATTGCCGGTGGCCTTCTCCAACGTTGTACGGGATAACATGAGCAACCCCGTCCAGGTAATCACAACAAACGGTCAGTCGTGGAGCATCTCGTGGTTTGTGGAGGAGGAGCATCCGCATCAAGTCGTTTTCACCGGAGGCTGGCGAGCCTTTTACGAACACTACCACCTACAAATCGGTGACTCAATGCTGCTATCGTATCACCAACCCAAGTTTTTCTGTGCGGCCATCCACGACACAACATACTTCGAGATCAACTACGGAAGAAACTTGAGAAACGGAAGTCTTCCGGCAATACCCGCACATGGCAACTATGCAGTCCAGTTCTTCGCGATAATCCCGGTGAACGACCCTGATACACTGAACACAATGTACGTCATGTTCTTCAACGGTCACACAATGGAAATCAACTATTTGGCCCATGCCGGCCCCGGGACGGACTCCACTTGTATAACCGATCCGTCGGCCCCCAGGTCAAGGCACATAGGCGATGGGTTCAGATCGACCAATCCGTTCTTTGTAATTCCAATCATGCACCGCCTGGCAAACCATTTTCTCCCGAATGTCCCCCCTCTGCCGGGAGTATGCGAGGATAGCCCAATTACGATTACCAACGACAGGGGCGCGTGGACCGTTCGGTTTACGCACTACGTCGGGAGGACGAACGGATGCTTTGGAATTGGCTGGTCTGCCTTAGCAACTGCATGCCAACTAAGACACGGCCATGTTTGTGTCTTCGAACGGCTTGCACCGCAAGAATACCGGCTGCATGTATATTGA 843 0.5184 MPPLADCRFFRFIIPNMENQFRLPVAFSNVVRDNMSNPVQVITTNGQSWSISWFVEEEHPHQVVFTGGWRAFYEHYHLQIGDSMLLSYHQPKFFCAAIHDTTYFEINYGRNLRNGSLPAIPAHGNYAVQFFAIIPVNDPDTLNTMYVMFFNGHTMEINYLAHAGPGTDSTCITDPSAPRSRHIGDGFRSTNPFFVIPIMHRLANHFLPNVPPLPGVCEDSPITITNDRGAWTVRFTHYVGRTNGCFGIGWSALATACQLRHGHVCVFERLAPQEYRLHVY 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02529 280 CDD B3_DNA 8 100 IPR003340 GO:0003677
Arst1g02529 280 Gene3D - 5 103 IPR015300 -
Arst1g02529 280 ProSiteProfiles B3 DNA-binding domain profile. 6 102 IPR003340 GO:0003677
Arst1g02529 280 SUPERFAMILY DNA-binding pseudobarrel domain 189 280 IPR015300 -
Arst1g02529 280 SMART B3_2 9 102 IPR003340 GO:0003677
Arst1g02529 280 Pfam B3 DNA binding domain 18 90 IPR003340 GO:0003677
Arst1g02529 280 Gene3D - 178 280 IPR015300 -
Arst1g02529 280 SUPERFAMILY DNA-binding pseudobarrel domain 9 108 IPR015300 -
Arst1g02529 280 PANTHER B3 DOMAIN-CONTAINING 7 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02529 Arst-Chr1 83572202 83573614 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g02529 17 279 B3 DNA Binding Superfamily AT3G18990 20.988 2.33e-11 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Arst1g02529 B3 7.9e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02529 - - adu:107492861 604.749