Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02500 ATGGTTGTGATGAACCCAATCTTGGCACTCTCCATTATTACCACCATTTTATTCTTGTCTCCAATGGCTTATTCAGAGAACGAAGCGGTGAAGAGCGCATTGGTGAGATTCATGGACAATCTTGCACCATGGAATAATAATTCAGAGAGAGAAGCAGGAAGGTACTGGGGATGGAACCTTGACACAGATCCATGCGCAGATAACTGGAAAGGTGTGAGTTGTTCCTCAGATGGAAGTGTGAAAGCCATTGTTCTTGATGATTCAAACCTGAGTGGAACCCTAGACGCCACCTCTCTCTGCATGGCGAAATCTCTTCAAATTCTGAGCCTCAAGAGGAACAACTTGCAGGGATCAGTGCCCGAAGCTATCGGAAACTGTAAGTATTTGACCCGTTTGTTCCTCAGCGATAACAACTTCTCCGGTGATCTTCCGACTTCTCTTCGACATTTATGCAGCTTGAGGTGGCTTGAAGTTGCCAGAAACAAGTTTACGGGTCCCATTTCCGATAAGATACCTGCCTCAGTCTTGATATCCTTTCTCGGTGAGAATAACAAGTTCACTGGGGAGGTACCTGATTTTGACTTCATGAAACTCATTCGATTCAACGTCTCCAACAACAACTTGAAGGGGCAGATTCCTGACGTGAGAAACAAGTTTGGTGTGGAAAGCTTTTCTGGAAATCCTGACTTGTGTGGATCGCCGCTTCCAGCGGCATGTCCACCTAGTCCCTCACCAAGGAAAGAAAAAAGATTATTCATCACTGACGGCGTGGCGATTTACTCTGGCTACATCATTCTTGGCATCACCGTGGTGGCATTCTTTGTGTACAAGCTAGTGAGGAAATCCATGAACAAAGTGGAAGCATCCAAGGCTCTCAACAAGAAGGAATGCCCAAGGCATCGATTAACTCGAAAGGATCCTGCAGGGGGCAATAATGGTGAAAAGAGCAGGGAGGATTCTTCTGAGAGCAAGGGTAGTGGTCGTGGCGGCGGCCGTGGCAGCGTTGAGATGAGATCAGAGCCATCGATAGCGTCACTTGAGAGTGGAATAACATTGAGCACATCAACGCTGGTAGTTCTGTCAAGCAGGGTATCAAAGGCGCTGAGATTTGAGGACTTGCTGAGAGCACCAGCTGAGTTGATTGGGAGAGGGATGCATGGGAGCCTCTACAAGGTGATGCTGGACAACGGTGTGTTCTTGGCTGTGAAGAGAATCAAGGATTGGGGAATCTCCGAAAGTGATTTTCAGAGGAGAATTGGGAAAGTTAGCCAAGTCAACCATCCATTTGTGTTGCCACCTCTTGCTTACTATTGTTCCCGCCAAGAGAAGCTTCTTGCATATGAGTACATGGACAATGGGAGTCTCTTCAACATGCTCTATAAAGTTGGATCACAAAATGGAAAACCCTTTGAGTGGGGAAGCAGACTAAACATTGCTGCAAAAATAGCAGAAACTTTAGCTTATATGCATGAAGAGCTACGAGAAAGTGGAATAGCACACGGAAACTTAAAATCAAGCAACATTTTATTCAACAACAACATGGAACCATTAATAAGCGAATATGGGCTAATGGTAATTGAACACCAAGCTCTGAGATCACTCTCTCACAGCAAGAGTGTGAGGAACAGGGTTCTAACTGCTGCACATGCATATAGCACCTTCAAAGTTGATGTATACGCCTTTGGGGTGATACTCTTGGAGCTTCTCACAGGGAAAGTGGTTCAGAATCAAGGGGTTTTTGATTTCGTTAAGTGGGTTAATTCTGTGGTTAGAGAGGAGTGGAGTGTTGAAGTGTTTGATAAGAACTTGGTGTCAGAAGGTGCGAGTGGAGAGAGGATGATGAACTTGTTGCAGGTTGCATTGAAATGCATCAATCCTTCTCCTGCTGATAGACCAAGCATGAGTGAAGTTGCATTGGCCATAGTTGCATTGAAAGAGGAGGAAGAAAGATCTTTAACATAG 1962 0.4531 MVVMNPILALSIITTILFLSPMAYSENEAVKSALVRFMDNLAPWNNNSEREAGRYWGWNLDTDPCADNWKGVSCSSDGSVKAIVLDDSNLSGTLDATSLCMAKSLQILSLKRNNLQGSVPEAIGNCKYLTRLFLSDNNFSGDLPTSLRHLCSLRWLEVARNKFTGPISDKIPASVLISFLGENNKFTGEVPDFDFMKLIRFNVSNNNLKGQIPDVRNKFGVESFSGNPDLCGSPLPAACPPSPSPRKEKRLFITDGVAIYSGYIILGITVVAFFVYKLVRKSMNKVEASKALNKKECPRHRLTRKDPAGGNNGEKSREDSSESKGSGRGGGRGSVEMRSEPSIASLESGITLSTSTLVVLSSRVSKALRFEDLLRAPAELIGRGMHGSLYKVMLDNGVFLAVKRIKDWGISESDFQRRIGKVSQVNHPFVLPPLAYYCSRQEKLLAYEYMDNGSLFNMLYKVGSQNGKPFEWGSRLNIAAKIAETLAYMHEELRESGIAHGNLKSSNILFNNNMEPLISEYGLMVIEHQALRSLSHSKSVRNRVLTAAHAYSTFKVDVYAFGVILLELLTGKVVQNQGVFDFVKWVNSVVREEWSVEVFDKNLVSEGASGERMMNLLQVALKCINPSPADRPSMSEVALAIVALKEEEERSLT 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02500 653 Gene3D Phosphorylase Kinase; domain 1 351 449 - -
Arst1g02500 653 ProSiteProfiles Protein kinase domain profile. 375 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g02500 653 FunFam Leucine-rich repeat receptor protein kinase EMS1 96 193 - -
Arst1g02500 653 SUPERFAMILY L domain-like 61 234 - -
Arst1g02500 653 Gene3D Transferase(Phosphotransferase) domain 1 450 652 - -
Arst1g02500 653 MobiDBLite consensus disorder prediction 289 325 - -
Arst1g02500 653 Pfam Protein kinase domain 379 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g02500 653 Pfam Leucine rich repeat 104 163 IPR001611 GO:0005515
Arst1g02500 653 MobiDBLite consensus disorder prediction 289 338 - -
Arst1g02500 653 SUPERFAMILY Protein kinase-like (PK-like) 379 638 IPR011009 -
Arst1g02500 653 Gene3D Ribonuclease Inhibitor 23 99 IPR032675 -
Arst1g02500 653 Gene3D Ribonuclease Inhibitor 100 246 IPR032675 -
Arst1g02500 653 ProSitePatterns Protein kinases ATP-binding region signature. 381 403 IPR017441 GO:0005524
Arst1g02500 653 PANTHER OS05G0588300 PROTEIN 8 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02500 Arst-Chr1 81942849 81945888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g02500 52 637 Receptor kinase-like Gene Family AT1G48480 34.198 1.31e-89 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Arst1g02500 Pkinase 1.6e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02500 - - ahf:112695663 1240.71