Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02499 ATGCGTGGTATCAGCTATTTGAATAATAAGTACTCATCACCATCTCCATTCCAATCTCATTCGTATGATGCTAATAACATGCCGCCATCATCATCTGTAATTAGCAGAATAAGTCCACTCATTCTGTTAGTTATAATAGTCTTAGCAGTTATCTTCTTCGCTTATGGCCTTGTCCATTTGATTCTATGGTTCTTCATCAAAATCCTATCATCATCCTCGTCGTCGTCGTCTAACAGGTTCCAAGAATCATCGAGGCGCTCCCGCGCGATTCAGAGACAGCTTCACCATCTCTTCCGAATGCACGATTCGGGACTAGAACAATCCACCATTGATGCTCTCCCAGTGTTCTACTACCAAGAATTGTTGGGGCTAAAAGAACCATTTGATTGTGCAGTGTGCCTCTGCGAATTCTCTGCGAACGAGAAGCTGAGGTTGGTTCCAATTTGCAGCCATGCATTTCACATGAACTGCCTCGACACATGGCTTCTCTCAAACTCTACATGTCCTCTCTGTAGAGCAAATCTCTCTAGCTCTATCGTGAATCAGAATCAGAATCCAGTTCGTGTTGTTGAGGAAGAGAATAAGAATGGTGGTGAAGGGAGTGAAGAGGGAGACGAAGGTGGTGGTGGGAGGAAAAGGGTGTTTTGTGTGAGACTTGGGAAACTGAGGAACGGTGAATTGATTGAGAGAGAAGAGAGTAGTAGTAGTAGTATTGGGTTGGATGGGAGAAGATGCTACTCAATGGGTTCATATGAGTATGTGGTTAGAGAATCGAATCTGAAAGTGGAAGTGGTGTTATCATCTCAGTCTCTTCATGTTGGTGGTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATGGAAAGAAGATAGGGAAGAAGAGAACAAGAGGTGAGAGCTTCTCAGTTTCAAAGATTTGGCTATGGTCCAACAAGATCAAATATAATCATCATAGATCCAATAATGCAGATGCAGATTTTCCTTTGTCACCAATAACAAAGAAAGCACTATTAATCTAA 1056 0.4186 MRGISYLNNKYSSPSPFQSHSYDANNMPPSSSVISRISPLILLVIIVLAVIFFAYGLVHLILWFFIKILSSSSSSSSNRFQESSRRSRAIQRQLHHLFRMHDSGLEQSTIDALPVFYYQELLGLKEPFDCAVCLCEFSANEKLRLVPICSHAFHMNCLDTWLLSNSTCPLCRANLSSSIVNQNQNPVRVVEEENKNGGEGSEEGDEGGGGRKRVFCVRLGKLRNGELIEREESSSSSIGLDGRRCYSMGSYEYVVRESNLKVEVVLSSQSLHVGGEEEEEEEEEEEEEEEEEEEEEEEDGKKIGKKRTRGESFSVSKIWLWSNKIKYNHHRSNNADADFPLSPITKKALLI 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02499 351 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 35 319 - -
Arst1g02499 351 MobiDBLite consensus disorder prediction 275 298 - -
Arst1g02499 351 SUPERFAMILY RING/U-box 109 183 - -
Arst1g02499 351 MobiDBLite consensus disorder prediction 269 312 - -
Arst1g02499 351 Coils Coil 272 302 - -
Arst1g02499 351 CDD RING-H2_EL5-like 129 172 - -
Arst1g02499 351 SMART ring_2 130 171 IPR001841 -
Arst1g02499 351 FunFam E3 ubiquitin-protein ligase ATL6 93 178 - -
Arst1g02499 351 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 104 181 IPR013083 -
Arst1g02499 351 ProSiteProfiles Zinc finger RING-type profile. 130 172 IPR001841 -
Arst1g02499 351 Pfam Ring finger domain 129 172 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02499 Arst-Chr1 81929000 81930171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g02499 31 326 C3H Transcription Factor Family AT2G18650 40.356 2.74e-53 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02499 - - adu:107492421 558.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g02499 1 81929000 81930171 Arst1g02499 1 81929000 81930171 ECH