Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02472 ATGGCGATGAAGAACTTGTACTGGTTGAAGGAAATGTCGAACAACAAAGGAGAGGGAGAAGAGGAATGGAGTGCTGATCTGTCACAGCTGTTCATAGGTTCGAAATTCGCTTCTGGAAGGCACAGCAGGATCTACAGAGGGATATACAAGCACATCGATGTTGCCATCAAGCTTGTGAGCCAGCCTGAGGAGGATGAGGAATTGGCTGCTCAGCTTGAGAACCACTTCACTTCTGAGGTTGCGCTTCTCTTTCGCTTGCACCATCCTAATATCATTACTTTTGTAGGAGCTTGCAAGAAGCCCCCTGTATTTTGCATAATCACAGAATACTTAGCTGGTGGCTCATTGAGAAGCTTCCTTCAAAGGCAAGGACCACATTCACTCCCTCTAGAACTTGTTCTAAAGCTAGCCTTAGACATTGCCAAGGGTATGCAATACCTTCACTCTCAGGGCATACTCCACAGGGACCTCAAATCAGAGAATCTTCTCTTGGGTGAAGACATGTGTGTCAAAGTAGCAGACTTTGGGATCTCGTGCTTAGAATCCCAGATTGGTAGTGCTAAAGGGTTCACTGGAACTTACCGTTGGATGGCGCCAGAAATGATCAAGGAGAAGCACCATACCAAGAAAGTAGATGTTTACAGTTTCGCCATTGTTCTTTGGGAGCTTCTAACAGGACTAACACCCTTTGAGAATATGACACCAGAACAGGCAGCATTTGCAGTGACTCACAAGAATGCAAGGCCTCCATTACCATGTGATTGTCCATGGGCATTTAGTAATCTAATAAACAAATGCTGGTCAAGCAATCCGAAAAAACGACCACACTTTGATGAGATAGTCACTATTTTGGAGAGCTACATAGAATCACTGGAAAAAGATCCTGAATTTTTCACCAATTACAAACCACGTCGTCCACGTAATCTGGTTCTCAAATGCTTACCAAAGTGTAACTGTCGCCATGTATCCTCTTCTTCCAAATCTTAG 987 0.4428 MAMKNLYWLKEMSNNKGEGEEEWSADLSQLFIGSKFASGRHSRIYRGIYKHIDVAIKLVSQPEEDEELAAQLENHFTSEVALLFRLHHPNIITFVGACKKPPVFCIITEYLAGGSLRSFLQRQGPHSLPLELVLKLALDIAKGMQYLHSQGILHRDLKSENLLLGEDMCVKVADFGISCLESQIGSAKGFTGTYRWMAPEMIKEKHHTKKVDVYSFAIVLWELLTGLTPFENMTPEQAAFAVTHKNARPPLPCDCPWAFSNLINKCWSSNPKKRPHFDEIVTILESYIESLEKDPEFFTNYKPRRPRNLVLKCLPKCNCRHVSSSSKS 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02472 328 PIRSF ILK 4 302 - -
Arst1g02472 328 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 27 287 - -
Arst1g02472 328 Gene3D Transferase(Phosphotransferase) domain 1 112 310 - -
Arst1g02472 328 Pfam Protein tyrosine and serine/threonine kinase 32 284 IPR001245 GO:0004672|GO:0006468
Arst1g02472 328 ProSiteProfiles Protein kinase domain profile. 30 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g02472 328 SUPERFAMILY Protein kinase-like (PK-like) 20 284 IPR011009 -
Arst1g02472 328 Gene3D Phosphorylase Kinase; domain 1 20 111 - -
Arst1g02472 328 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Arst1g02472 328 FunFam Serine/threonine-protein kinase isoform 1 20 112 - -
Arst1g02472 328 PRINTS Tyrosine kinase catalytic domain signature 211 233 IPR001245 GO:0004672|GO:0006468
Arst1g02472 328 PRINTS Tyrosine kinase catalytic domain signature 108 121 IPR001245 GO:0004672|GO:0006468
Arst1g02472 328 PRINTS Tyrosine kinase catalytic domain signature 192 202 IPR001245 GO:0004672|GO:0006468
Arst1g02472 328 PRINTS Tyrosine kinase catalytic domain signature 255 277 IPR001245 GO:0004672|GO:0006468
Arst1g02472 328 PRINTS Tyrosine kinase catalytic domain signature 146 164 IPR001245 GO:0004672|GO:0006468
Arst1g02472 328 SMART serkin_6 30 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g02472 328 CDD STKc_MAP3K-like 37 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02472 Arst-Chr1 79607329 79611888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g02472 15 317 MAP Kinase Kinase Kinase AT1G62400 61.386 8.62e-135 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Arst1g02472 PK_Tyr_Ser-Thr 3.9e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02472 - - adu:107492149 679.093