Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02417 ATGGACACCCTCCAATTTTTCCTCTTCATATTCCAGCTTTTACTCTGCCTCAACCCAATCTCCGCGGTGGACTTCCTCTTCAACTCCTTCACCGGCGCCACCAACACCACCAACGTGACCCTCATCGCCGACGCGCTCGTAGACTCCTCCGTCGTCCGCATGACCAACGACTCCAACCAATACTCCTTCGGCAGAGCCTTCTACACTAAAAAAGTCACCATCAAGAAACCCTTCCCTTCTTCTTCTTCTTCTTCAAGCAACTTCTCTTCCTTCTCGGCCTCCTTCGTCTTCTCCATCTTGCCGCAGATCCCGACGAGTCCCGGATTTGGCCTCGCTTTCGTTCTCTGCAACACAACCTCCCCTCCCGGCGCACTCGCCAGCCAGTACTTCGGTCTCTTCACCAACGCCACCTCACCTCCCCTGTTCCCGCTCCTCGCCGTCGAGTTTGACACAGGCCAGAACCCTGAGTTCGGCGACCCCGACGACAACCACCTCGGCATCGACCTCAACAACATCGTTTCCAAGAAAACTCAGCCCGCAGGGTACTACAACTCCACCGGAGGATTCGTCCCCCTCCGAATGCGAACGGGACAGAACGTTCACGCTTGGATCGATTTCGACGGCGAGACTATGCAGATCAACGTCACCGTCGCTCCGGTGGGGCTTCCCCGCCCGAAGAAACCAACTCTCTCGTACACAGACCCGGAAATGGCGAACTACTTGTCTTCTGATATGTTCGTTGGGTTCTCTGCTTCGAAAACCAATTGGATCGAGGAACAGAGAGTACTCGCATGGAGTTTCAGCACTTTAGGTTCCGCAAGAGACATAAATACAACTAATTTACCAGTTTTCCAGCCTACAACCTCCTCTTCCTCTCTCTCCGGCGGCGCAATCGCCGGAATCGTTCTTGGCTGCGTCGCTTTCGTGGCAATCTTTGTCTCGATCTGTTACCTGTGGTGGCGAAAGAAGATGAAGGAGGAAGAAGAAGAGATCGAGGATTGGGAACTGGAGTACTGGCCCCACAGATTCTCCTACGACGAACTCAGAACCGCAACGGGAGAATTCAGGAGGGAGAACCTTCTAGGCTCCGGCGGGTTCGGAAGAGTATACAGAGGAATGCTTCAGAACAAAACAGAGGTTGCCGTGAAATGCGTCAACCACGACTCAAAGCAAGGCGTGAGGGAATTCATGGCGGAAATTTCAAGCATGGGGAGGCTGCAGCACAAGAACTTGGTCCAAATGAGAGGGTGGTGCAGAAAAGGAAACGAGCTTATGCTGGTTTATGACTTCATGCCCAACGGGAGCCTCAACAAGTGGGTGTTTGACAACCCGCCGAAGCTTCTAGAATGGGGGAGGAGGCGAAGGGTGCTCGTCGACGTGGCGGAGGGGCTCAACTACCTTCACCACGGGTGGGACCAGGTTGTTATTCACAGGGATATTAAGTCTAGTAATATCTTGCTAGACTCTGACATGAGGGGGAGGCTTGGGGACTTTGGTTTGGCGAAGCTATACCAGCAGGGGGAGGTTCCCAACACCACGCGTGTCGTTGGCACATTGGGGTACCTCGCGCCAGAGTTGGCTACTGTGGCGGTGCCAACTTCGGCGAGTGATGTTTATAGTTTTGGAGTGGTGCTTTTGGAGGTGGCATGTGGGAGGAGGCCGATTGAGACGTCGGCGGCGGAAGAGGAGGTGGTGCTAATTGACTGGGTGAAGGAGCTGTACGCCAGTGGGAGGATGTGTGAGGCTGCGGACCCGAGGATTGAAGGGGAGTATGAGGTTGGGGACATGGAGATGGTGCTCAAGCTTGGGTTGGCTTGTTGCCACCCTGAGCCTCAGAGGAGGCCAACGATGAAGGAGGTGGTTGCAGTGCTTGTGGGGGACAATGTTGCGGAGGAGCCGGGGAAAGTGTTGTCTGATTTGGTGCGTGGCGACGGTGGTGGTCTGGAGAAAGAGGAGGAGACCACGGCTTTACAGGGAAACCTTCCGGATTGA 1992 0.5472 MDTLQFFLFIFQLLLCLNPISAVDFLFNSFTGATNTTNVTLIADALVDSSVVRMTNDSNQYSFGRAFYTKKVTIKKPFPSSSSSSSNFSSFSASFVFSILPQIPTSPGFGLAFVLCNTTSPPGALASQYFGLFTNATSPPLFPLLAVEFDTGQNPEFGDPDDNHLGIDLNNIVSKKTQPAGYYNSTGGFVPLRMRTGQNVHAWIDFDGETMQINVTVAPVGLPRPKKPTLSYTDPEMANYLSSDMFVGFSASKTNWIEEQRVLAWSFSTLGSARDINTTNLPVFQPTTSSSSLSGGAIAGIVLGCVAFVAIFVSICYLWWRKKMKEEEEEIEDWELEYWPHRFSYDELRTATGEFRRENLLGSGGFGRVYRGMLQNKTEVAVKCVNHDSKQGVREFMAEISSMGRLQHKNLVQMRGWCRKGNELMLVYDFMPNGSLNKWVFDNPPKLLEWGRRRRVLVDVAEGLNYLHHGWDQVVIHRDIKSSNILLDSDMRGRLGDFGLAKLYQQGEVPNTTRVVGTLGYLAPELATVAVPTSASDVYSFGVVLLEVACGRRPIETSAAEEEVVLIDWVKELYASGRMCEAADPRIEGEYEVGDMEMVLKLGLACCHPEPQRRPTMKEVVAVLVGDNVAEEPGKVLSDLVRGDGGGLEKEEETTALQGNLPD 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02417 663 CDD STKc_IRAK 361 624 - -
Arst1g02417 663 SUPERFAMILY Protein kinase-like (PK-like) 332 624 IPR011009 -
Arst1g02417 663 SMART serkin_6 355 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g02417 663 SUPERFAMILY Concanavalin A-like lectins/glucanases 21 284 IPR013320 -
Arst1g02417 663 FunFam L-type lectin-domain containing receptor kinase S.4 21 275 - -
Arst1g02417 663 Coils Coil 317 337 - -
Arst1g02417 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
Arst1g02417 663 ProSitePatterns Legume lectins beta-chain signature. 145 151 IPR019825 -
Arst1g02417 663 ProSiteProfiles Protein kinase domain profile. 355 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g02417 663 Gene3D - 21 285 - -
Arst1g02417 663 FunFam L-type lectin-domain containing receptor kinase S.4 431 635 - -
Arst1g02417 663 MobiDBLite consensus disorder prediction 640 663 - -
Arst1g02417 663 PANTHER - 40 627 - -
Arst1g02417 663 Gene3D Phosphorylase Kinase; domain 1 340 430 - -
Arst1g02417 663 Pfam Protein kinase domain 356 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g02417 663 Pfam Legume lectin domain 23 281 IPR001220 GO:0030246
Arst1g02417 663 CDD lectin_legume_LecRK_Arcelin_ConA 23 269 IPR001220 GO:0030246
Arst1g02417 663 ProSitePatterns Protein kinases ATP-binding region signature. 361 383 IPR017441 GO:0005524
Arst1g02417 663 FunFam L-type lectin-domain containing receptor kinase S.1 340 430 - -
Arst1g02417 663 Gene3D Transferase(Phosphotransferase) domain 1 431 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02417 Arst-Chr1 74220830 74223308 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g02417 21 626 Receptor kinase-like Gene Family AT1G15530 66.667 0.0 803
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Arst1g02417 Pkinase 4.8e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02417 - - gmx:100780660 977.237