Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02413 ATGCCATCCCGTGGTCATGCATTTGCAATGGCTGTGGTTGCTGCAGCCATTGCTATGCTACTTGTTGCTGTGATTTTCTTCTACTTGAAAAAATTTGCTTGCTCTTGGCATTACCACCATAGACACAGAGTTGCAGCGAGTTTTCGAAGAGAAGCAGGATTTAACCAAGAGGATATAAGGAAAGTTAATAATATGAAAGGGTTACTTGCTGAAGAAAATGGGATTGATATTCTGTATATGGTGGAAACACAAGGAAGGCATTTCAAAACTAGTTTCCCAACTAGAATATTCAATCCGAGTTATGAAGATAATGAAGAAAAGGAAGAAGAAGAAAAGAGAATAGATGTATTGGTTCAAAGATCTATGCATTATGAGACTCAAGAGGTTCCATTGCTATGTGAATCTCCAGGTTCAGGTTTGATGATTCATGAGGATTTAGTTAAACCACCACCACCACCACCTAAAGGAAAAGCCAACATGGAAAACAACACCTTAGAGGTTGCAGAATCAAGAGAGAAGGGTGCTAGCCAAACAAGACTCAAACCTCTACATTGGGATAAGGTTGTAGCTAATGTTGATCATTCTACAGTGTGGGATCACATCAATGATGGCTCTTTCAGGTTTGACAATGAACTCATAGAAACACTCTTTGGATACTCAACCAAGAACCAAACCAATGAAAGAAACCTATGTCATGCATCTTCTGCTCAGTTATTCCTTGTGGACCCTAGAAAATCCCAAAACACATCAATTGTGCTAAGGTCTCTTGCAATTTCTCACAAGGAAATTATGGACGCGCTCGATGATGGACAAGGAATCAGTCTTGAGACACTTGAAAAACTTACTAAGATAGCTCCTACACAAGAAGAAGAAGCCAAAATCATCCAATTCAGTGGAAATCCAGATAAACTTGCTCATGCTGATTCATTCCTCTACTGCATCCTCAAAGCGGTTCCAACAGCATTCATTCGCCTGAAAGCAATGCTTTTCAGATCAAATCATGATTTTGAAGCCGTTCAGCTTAAAGAAAACTTACAAACGCTTGAAAAGGGTTGCAAGGAGATGAGGGCTAGTGGCCTATTACTGAAGTTTCTTGAGGCAATTCTCAAAGCTGGAAACCGGATGAATGCCGGAACTTCTAGGGGAAATGCACAAGGTTTCAACCTAAGTGCTCTTAGGAAGCTTCCTGATGTGAAAAGCATTGATGGGAAGACTAGTTTGCTACACTTCATTGTAGAGCAGGTGGCTCAGTCAGAAGGAAGAAGAGAAGCTATGAATCAAAAGCATAACATTCCCAAAATCAATAGTGATATAAGCAACTCCAATGAAAACAATAATAGCCTTGTGCAACATGAGACAGAGAAAGAGTATCTGATGCTTGGTTTACAAGTGTTATTGGGAGGTATAAAGGATGAGTTATCTGAAGTAAAGAAAGCAGCAATAATTGATCATCAGAATTTCATTAGGATGTTATACATTCTCAATGCTCGTGTAAGCGAAATTCGAGAGATTGTAACCAAATGTTGTGGCGACAACAATGAGAGAGGTGGATTTCTTAAGGAAATGAAAGGGTTTGTCGAGGAATGTGAGGAGGAGCTTAAAGTTGTGAAAGATGAACACCTTAGGATCATGGAGCTTGTGAAGAAAACCAATGAGTATTATCTAGGAGGCGGAGGAGGATCAAACCCCTTTGAACTGTTTCTTATTGTGAGAGATTTTGTTGACATGGTGAATGAGGTTTGCAGTGATCTCAGAAGGAAGATAGAAAAGAAGAATGTAGGAGGAGGAGAAGGTGCATCAACAACACCACCTCTTTCACCCTCAAAGAAAGCACCACTCAGGTTCCCAAAGTTTGATTTGCACTTTCTATCAAACATGTCAAGTGCAACATCATGTTCTAGCCTATCAGATGATGATTTCTGA 1923 0.3989 MPSRGHAFAMAVVAAAIAMLLVAVIFFYLKKFACSWHYHHRHRVAASFRREAGFNQEDIRKVNNMKGLLAEENGIDILYMVETQGRHFKTSFPTRIFNPSYEDNEEKEEEEKRIDVLVQRSMHYETQEVPLLCESPGSGLMIHEDLVKPPPPPPKGKANMENNTLEVAESREKGASQTRLKPLHWDKVVANVDHSTVWDHINDGSFRFDNELIETLFGYSTKNQTNERNLCHASSAQLFLVDPRKSQNTSIVLRSLAISHKEIMDALDDGQGISLETLEKLTKIAPTQEEEAKIIQFSGNPDKLAHADSFLYCILKAVPTAFIRLKAMLFRSNHDFEAVQLKENLQTLEKGCKEMRASGLLLKFLEAILKAGNRMNAGTSRGNAQGFNLSALRKLPDVKSIDGKTSLLHFIVEQVAQSEGRREAMNQKHNIPKINSDISNSNENNNSLVQHETEKEYLMLGLQVLLGGIKDELSEVKKAAIIDHQNFIRMLYILNARVSEIREIVTKCCGDNNERGGFLKEMKGFVEECEEELKVVKDEHLRIMELVKKTNEYYLGGGGGSNPFELFLIVRDFVDMVNEVCSDLRRKIEKKNVGGGEGASTTPPLSPSKKAPLRFPKFDLHFLSNMSSATSCSSLSDDDF 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02413 640 Pfam Formin Homology 2 Domain 173 577 IPR015425 -
Arst1g02413 640 Coils Coil 519 539 - -
Arst1g02413 640 Coils Coil 338 358 - -
Arst1g02413 640 SUPERFAMILY Formin homology 2 domain (FH2 domain) 149 591 - -
Arst1g02413 640 ProSiteProfiles Formin homology-2 (FH2) domain profile. 170 603 IPR015425 -
Arst1g02413 640 Gene3D Formin, FH2 domain 192 593 IPR042201 -
Arst1g02413 640 PANTHER FORMIN-RELATED 10 618 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Arst1g02413 640 SMART it6_source 170 592 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02413 Arst-Chr1 73489177 73491547 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g02413 11 637 FH2 protein (formin) Gene Family AT1G70140 38.527 2.13e-147 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02413 - - aip:107618940 910.598