Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02229 ATGGCGGCGACACCGTCGTCGAACCGTTCCCCCGACGACTTCACCGTCGATCAAACGCCGCTAATCGCGAACTCTAACGGCGGCGGTGGTGGAGGCGAATCGAACTCCGGCCGCAGATTCGTTCGGCGGCAGAGCCTCCGCCAGGCTGCGCGGTTTCTCCGGCAGGGGAGCGGGCGTAGGTCGATGCGGGAGCCGTCGATGGTGGTGAGGGAGACGGCGGCGGCGCAGCTGGAGGAGCGGCAGAGCGATTGGGCGTACTCGAAGCCGGTGGTGGTGCTCGACGTCCTCTGGAACTTCGCGTTCGTGGTGGCAGGCGTCGCTGTGCTAGTCCTGAGCCGGAACGAGTCGCCAAACGCGCCGCTGAGGTTGTGGATCTTAGGGTACGCGGCGCAGTGCATTGTCCACGTGGCGTGCGTGTGCGTTGAGTATCGGAGGAGGAGGAGGAGGACGGAGCAGCAGCAGCAGAGCACGAGCGACGTCGTTCAAGGTGTTGATGGAGTTGGCGTCGGGGGAAGTGGAGATTTAAGCTCCGGTTCCATGGAAGGTTCTGGACACTATTTGACATTGGCTCAATTCGATGAGGACGGCACAAGCATGGCAAAGCATTTGGAATCAGCCAACACAATGTTTTCCTTTATTTGGTGGGTTGTTGGGTTCTATTGGGTATCAGCTAGTGGTCAAGACTTAACCCAAGAGGCTCCTCTGCTTTATTGGTTATGTATAGTCTTCCTGGGTTTCGATGTTTTCTTTGTCGTTTTCTGCATTGCACTGGCATGCATCATTGGTATTGCTGTTTGCTGTTGTCTTCCGTGCATCATTGCACTTCTATATGCAGTTGCAGACCAGGCAAGGGCATCCAAAGAAGATATTGAGCAGTTGTCGAAATTCAAATTCCAAAGGAATGAAAACAATGAGAAACTCCTATTGAACATGTTCTTTCTGACGAGGATGCGGAATGTTGCATCTGCCTTTCTGCTTATGAGGATGGTGTTGATCTAAGACAACTTCCCTGTGGTCACCATTTTCACTGTGCTTGTGTGGACAAATGGCTATACATTAATGCTACCTGCCCCCTCTGCAAGTATAATATCCTAAAAAGTAGCAGAAGTGCTCAAGAGGAAGTGTAG 1127 0.5333 MAATPSSNRSPDDFTVDQTPLIANSNGGGGGGESNSGRRFVRRQSLRQAARFLRQGSGRRSMREPSMVVRETAAAQLEERQSDWAYSKPVVVLDVLWNFAFVVAGVAVLVLSRNESPNAPLRLWILGYAAQCIVHVACVCVEYRRRRRRTEQQQQSTSDVVQGVDGVGVGGSGDLSSGSMEGSGHYLTLAQFDEDGTSMAKHLESANTMFSFIWWVVGFYWVSASGQDLTQEAPLLYWLCIVFLGFDVFFVVFCIALACIIGIAVCCCLPCIIALLYAVADQARASKEDIEQLSKFKFQRNENNEKLTDNTQGSAGGVMIECRVDSPIEHVLSDEDAECCICLSAYEDGVDLRQLPCGHHFHCACVDKWLYINATCPLCKYNILKSSRSAQEEV 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02229 394 FunFam E3 ubiquitin-protein ligase At1g12760 325 390 - -
Arst1g02229 394 CDD RING-H2_RNF6-like 338 380 - -
Arst1g02229 394 Pfam Ring finger domain 338 380 IPR001841 -
Arst1g02229 394 ProSiteProfiles Zinc finger RING-type profile. 339 380 IPR001841 -
Arst1g02229 394 PANTHER TARGET OF ERK KINASE MPK-1 57 385 - -
Arst1g02229 394 SUPERFAMILY RING/U-box 328 385 - -
Arst1g02229 394 SMART ring_2 339 379 IPR001841 -
Arst1g02229 394 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 323 387 IPR013083 -
Arst1g02229 394 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02229 Arst-Chr1 58631197 58635406 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g02229 42 387 C3H Transcription Factor Family AT1G68070 49.716 7.58e-114 334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02229 - - ahf:112722254 706.057