Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02215 ATGGCGTCACTTCACACCACCACTACAGCCTCATTCCCTTCCATCCAAACCCCAAGATCCCTCCTCACCCACCCAAAACCCATCCTCAACCTCTCCCTCTCCACTACTACCTTCCCCTCCCTCTCCCTCAAACTCACCCGCCCCCGCCGCTCCGCCGGAGCCCTCGGCGCCCGCATGGTCTCCACCGCTGCCGCAAGCTACGCCCTCGCCCTCGCCGACGTCGCCAAATCCAACAACACCCTTGACGCCACCACAACCGACATCGAGAAAATCGATGAAATCTTCTCCGATCCACAGGTGTTCAAATTCTTCGCCAACCCAACCGTAGATGCCGAACGGAAGAAGAATCTCGTCGATGAAATTGCCACGTCATCAAGCTTCCAATCCCACACGCGCAACTTCCTGAACATTCTGGTCGATGCGAAGCGCATTGGGCTGGTGAAGGAGATTGCGAAGGAGTATGAATTCGTGTACAACACGCTCACAGATACGGAAATGGCGGTGGTGAGCTCGGTGGTGAAGCTCGAGTCGCAGCACTTAGCACAGATCGCGAAGCAGGTGCAGAAGCTAACGGGGGCTAAGAACGTTAGAATCAAGACAGTTATTGACCCGAGCCTGGTGGCTGGGTTTACTGTTAGGTATGGTAATTCTGGATCGAAGTTGATTGATATGAGCGTCAAGAAGCAGCTTGAGGAGATTGCTGCTCAGCTTGATTTGGGTGACATCAAACTCAATGAATGA 741 0.5398 MASLHTTTTASFPSIQTPRSLLTHPKPILNLSLSTTTFPSLSLKLTRPRRSAGALGARMVSTAAASYALALADVAKSNNTLDATTTDIEKIDEIFSDPQVFKFFANPTVDAERKKNLVDEIATSSSFQSHTRNFLNILVDAKRIGLVKEIAKEYEFVYNTLTDTEMAVVSSVVKLESQHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTVRYGNSGSKLIDMSVKKQLEEIAAQLDLGDIKLNE 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02215 246 PRINTS ATP synthase delta subunit signature 143 157 IPR000711 GO:0015986|GO:0046933
Arst1g02215 246 PRINTS ATP synthase delta subunit signature 132 143 IPR000711 GO:0015986|GO:0046933
Arst1g02215 246 PRINTS ATP synthase delta subunit signature 194 209 IPR000711 GO:0015986|GO:0046933
Arst1g02215 246 PRINTS ATP synthase delta subunit signature 63 82 IPR000711 GO:0015986|GO:0046933
Arst1g02215 246 PRINTS ATP synthase delta subunit signature 212 230 IPR000711 GO:0015986|GO:0046933
Arst1g02215 246 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 59 162 IPR026015 -
Arst1g02215 246 Hamap ATP synthase subunit delta [atpD]. 59 239 IPR000711 GO:0015986|GO:0046933
Arst1g02215 246 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 196 215 IPR020781 GO:0015986|GO:0016020|GO:0046933
Arst1g02215 246 Gene3D - 63 155 IPR026015 -
Arst1g02215 246 Pfam ATP synthase delta (OSCP) subunit 64 237 IPR000711 GO:0015986|GO:0046933
Arst1g02215 246 NCBIfam ATP synthase F1 subunit delta 64 237 IPR000711 GO:0015986|GO:0046933
Arst1g02215 246 PANTHER ATP SYNTHASE DELTA CHAIN 49 238 IPR000711 GO:0015986|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02215 Arst-Chr1 57988304 57990020 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g02215 40 244 Primary Pumps ATPases AT4G09650 68.269 1.17e-100 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02215 K02113 - qsa:O6P43_030724 319.701