Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02213 ATGCGTTCTGACACTTCCAAATTCCCCAAACCCTTCCACCTCACAGACAACCTACGAGTTTCCGAAACGCACTCCAACAAAAAGAGAGAAACACAGAAAGACAAAATACACCGCGCTGGTGGACGAGGAATGGCCACCACTAGCCTCGACGGCGCCGGAGAAGATCGTGTTCTGGCGACGGCGCAGCAGATCCTCATGAGTCTCAACACTCCCAAGGAGGTTCGCCAGGACATGCTCCTCATTTTCTCCTCCTTCGATAACCGTCTCTCTACCATTTCTGACCTCATCGACGCCGACAACGACTCCAAGTCCACCATCTCCGACGCCGTTCCCGCCGATGAGGAGGAACAAGAAGAAGACCTTGACCGCCTCGAGGCCGCCATGAAAGTCATCCTCCGCTGGGACGCCTCCTTCTCCGGCGGCGGCGATTTCTTGCGCCACTCCACCTCCATCCTTGACTCGCATGTCGACGGAGTAGAGTACTTCTCTGCCGTTGATGACATCATCCAGTGGATCGATGAAAATCTCTCGTTAGCGCCGCCGTTGCCACCTCGCCGAGCCGCCATGTGTGACCGCGCCGAAAAGGCTATCCAGATCGCGATGACAAGGCTCGAGCACGAGCTCCGCCATGTGCTGATCCACAGCACCGTCCCCCTAGACGCCGACAGCCTCTACAGCTCGGTGCATAGGGTTTCACTCTCGTTCGCCTCACACGACGGCGCCGCCACCGCCACCGCCGAAATCGACGGAAGCTCGGAGAGCTTTGGCAAAACCCCAAATCACCGGTTCCACGAGCGCGTCGCGAGCTTTGAAGACGAAAACGAAAACGATGGCGTTTCAATCAATTTGGTGCATCCCGATGCGGTTCCAGAGCTGAGAGAAATCGTAACTCGAATGATAAGGTCTGGTTACGAAAGAGAGTGCCTTCAGGTTTATAGCGGTGTTAGGCGTGACGCTTTGGATGAGTGCTTGGCTATTATTGGTGTCGAGAGGTTGAGTATCGAAGAGGTTCACAGGGTTGAATGGAAGGTTCTAGATGAGAAGATGAAGAATTGGGTTCATGCTCTTAAGATTAGTGTTGGGGTTTTGCTGAGTGGTGAGAAGAGGCTCTGTGAAAATGTGTTTGGGGATTTGGTTGAGGTCAAAGAGGTATGTTTTAATGAGATTGCTAAAGGGTGTGTTATGCAGTTGCTGAATTTCGCGGAGGCTGTCTCAATTTGTAAGAGGTCCCCGGAGAAGTTGTTCAGGATATTGGATATGTACGAGGCATCGAGGGATGTTCTACCTGATTTGGAGGCGATGGTTTCTGATGAGTTTGTGGCTGGTGAGGCCAGGGGAGTGCTTAGTGGACTCGGCAATGCCGTGATAGGGACGTTTGCCGAGTTTGAGAATTGTATTAGGAATGAGACTTCCAAGAAGCTGGTGATTACAGGGGATGTTCATCCGTTGGCTCGATATGTGATGAACTACCTAAAGTTGCTTGTGGATTACAGTGATCCCTTGAACTTGCTCTTGGAAATCAGAGAAGAGGATCTTTATCGGTTTCAAAATGATTTCCAGGGTGATGTTTCCCAGCTAGAGGCCATTTCTCCCTTAGGACAAAGAACGTTGTTGTTGATGTCTGAGCTTGAGTTTAACCTTGAGGAAAAATCAAGGCTCTATGAGGACAACGCACTGCAGCAGATATTCTTGATGAACAATCTCTATTACCTAGTGTGGAAAGTGAGAGACTCCGAAATCAGGAAGGTCTTAGGGGATGATTGGATCCGGAAGCGCCGTGGCCAGATTCGCCAGTATGCTACAGGCTATCTCAGGGCCTCTTGGACCAGAGCCTTGGCTTGTTTGAAGGATGAAGGAATTGGAGGGAGCTCTAGTCTTAGTAGTGCCTCAAAGATGGCCTTGAAGGAAAAGTTCAAGAGTTTCAATGCCTGTTTTGAAGAGATTTATAGGATTCAGACAGCTTGGAAGGTACCGGATGACCGGCTTCGTGAAGAGCTGCAGTTATCTATTTCGGAGAAGGTGATTCCGGCCTACCGCTCGTTTGTGGGAAGGTTTAGCAGTCATCTAATAGAAGGAAGGCATGCTGGAAAATACATTAAGTATACCCCAGAGGATCTTGATACCTATTTATTGAATTTATTTGAAGGGTCCCCTGCTGTATTGCATCACATAAGGAGAAAAAGTACATAG 2190 0.4991 MRSDTSKFPKPFHLTDNLRVSETHSNKKRETQKDKIHRAGGRGMATTSLDGAGEDRVLATAQQILMSLNTPKEVRQDMLLIFSSFDNRLSTISDLIDADNDSKSTISDAVPADEEEQEEDLDRLEAAMKVILRWDASFSGGGDFLRHSTSILDSHVDGVEYFSAVDDIIQWIDENLSLAPPLPPRRAAMCDRAEKAIQIAMTRLEHELRHVLIHSTVPLDADSLYSSVHRVSLSFASHDGAATATAEIDGSSESFGKTPNHRFHERVASFEDENENDGVSINLVHPDAVPELREIVTRMIRSGYERECLQVYSGVRRDALDECLAIIGVERLSIEEVHRVEWKVLDEKMKNWVHALKISVGVLLSGEKRLCENVFGDLVEVKEVCFNEIAKGCVMQLLNFAEAVSICKRSPEKLFRILDMYEASRDVLPDLEAMVSDEFVAGEARGVLSGLGNAVIGTFAEFENCIRNETSKKLVITGDVHPLARYVMNYLKLLVDYSDPLNLLLEIREEDLYRFQNDFQGDVSQLEAISPLGQRTLLLMSELEFNLEEKSRLYEDNALQQIFLMNNLYYLVWKVRDSEIRKVLGDDWIRKRRGQIRQYATGYLRASWTRALACLKDEGIGGSSSLSSASKMALKEKFKSFNACFEEIYRIQTAWKVPDDRLREELQLSISEKVIPAYRSFVGRFSSHLIEGRHAGKYIKYTPEDLDTYLLNLFEGSPAVLHHIRRKST 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02213 729 MobiDBLite consensus disorder prediction 20 40 - -
Arst1g02213 729 PANTHER EXOCYST COMPLEX PROTEIN EXO70 116 716 IPR004140 GO:0000145|GO:0006887
Arst1g02213 729 Gene3D Exocyst complex component Exo70 151 721 - -
Arst1g02213 729 Pfam Exo70 exocyst complex subunit 350 711 IPR046364 GO:0000145|GO:0005546|GO:0006887
Arst1g02213 729 SUPERFAMILY Cullin repeat-like 155 715 IPR016159 -
Arst1g02213 729 MobiDBLite consensus disorder prediction 1 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02213 Arst-Chr1 57849550 57851947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g02213 55 728 EXO70 exocyst subunit family AT5G50380 55.492 0.0 710
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02213 K07195 - adu:107489765 1414.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g02213 1 57849550 57851947 Arst1g02213 1 57849550 57851947 ECH
Arst3g03820 3 108814717 108819371 Arst1g02213 1 57849550 57851947 PCT