Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02192 ATGGGCATGAAGATCATATCGGTCATCCCAGCATTGGATTCTCATACGCCAATTTTTGCATCATCCTTCACAATGGAGCTTATTAAGAAACGCTTGAAGGAACATGGTATTTTTGTTCCATCCAGACTCAAAGTATTTAGAACAAGGAAGAAGTTTATGGCAGGGCCTTTTGAGATAGATCCAATCACGGTGACCCATTCTATTCCTGATTGCTGTGGTTTAGTACTTCGTTGTTCTGATGGGACTATTCTTCACACCGGGGACTGGAAGATTGATGAAACACCATTAGACGGTAAAGTTTTCGATCGTGAAGCTCTAGAGGAGCTCTCTAAAGAAGGAGTAACATTGATGATGAGCGATTCAACAAATGTACTCTCACCTGGAAGGACAACCAGTGAATCTGTCGTGGCAGATGCATTGTTGAGGCATATTTCAGCTGCTAAAGGAAGGGTTATTACGACTCAGTTTGCATCAAATATACATCGTCTGGGAAGCATCAAAGCTGCTGCTGATTTAACTGGTAGAAAGCTGGTATTTGTTGGCATGTCTTTAAGGACATACTTAGATGCAGCTTGGAAAGATGGAAAGGCTCGAATTGATCCATCCACTTTGATTAAAGCGGAGGATATTGATGCTTATGCTCCAAAGGATTTGCTAATTGTTACAACAGGCTCCCAAGCAGAACCTCGTGCGGCCTTGAATCTTGCGTCTTATGGAAGTAGTCATTCTTTCAAACTAACAAAGGAAGATGTTGTTTTGTATTCAGCTAAGGTTATCCCTGGCAATGAGTCCCGTGTTACAGACATGCTAAACCGCATATCAGAAATTGGATCAACAATAGTTATGGGGAAGAATGAATATCTGCACACGTCTGGTCATGGGTATCGCGGAGAATTGGAAGAAGTACTTAGAATTGTGAAACCACAGCATTTTCTTCCCATACATGGGGAACTCTTGTTCTTGAAAGAACATGAATTGCTTGGAAAGTCCACTGGCATTCGACACACCACTGTTGTTAAGAATGGAGAGATGCTTGGTGTTTCACATTTGAGAAATAGAAGAGTCCTTTCTAATGGCTTCATTTCACTTGGAACAGAAAATTTGCAGTTGAAGTATAGTGATGGTGACAAAGCATTTGGTACATCGAATGATCTCCTTATTGATGAAAGAATGAGAATTGCATTAGATGGCATCATTGTGGTTAGCATGGAAATATTCCGCCCTCAAAATCTAGATGATCAAGTTGGAAACACATTGAAAGGCAAGATAAGAATTACTACAAGATGCCTGTGGCTTGACCAAGGGAAGCTGATGGATGCACTTCATAAAGCTGCGAATGCTGCCCTTTCAAGCTGCCCTGTAAACTGTCCACTGGCTCACATGGAAAGAATTGTGTCTGAGGTGCTGAGGAAAATGGTGAGGAAGTATAGTGGAAAGCGGCCTGAAGTTATTGCCATTGCTGTAGAAAATCCTTCAGCTGTTATTGAAGATGAGGTAAAGACAAAGTTGTCTGGCAAAGCCCATGTGGATGGGATATCAACATGGAGAAGAGTGTTAGATGGGCATGGGAAGGAAAATAACTCCACTAAAATGCAAATTAGAGGTGTTGAAGGATTAGCATCTGAAGAATACACTACCACCTCAAGTGGAGATGATGATGATATTTCTGAAACAGAGGATCAAGATGAATTTTGGAAGTCATTCGTCGATTCATCGTCAGCTGAGAAGTCAATCAAAGCTAACAATGGTTATGTTCCTCAAAAGGAGAATAAGCCCCAACTGAAGAAAGATAGTTCTGAAGAGTCTGAAGAAGAAATGTCCGAAACATCAAATTTAGAATCCAAATATTCAAAATCTGCAAAGAGAAATAAATGGAAACCTGAGGAAATTAAGAAGCTGATTGATATGCGGGGTGAACTACATGATCGATTCCAAGTAGTAAAGGGGAGGATGGCCCTTTGGGAAGAAGTATCTCAGAACTTGTCGGCAAATGGGATCAGCAGAAGTCCTGGGCAGTGCAAATCTCTATGGACATCTTTGTTACAGAAATATGAGGAGGTCAAGAATGAGAAGAATACCAAGAAAAAGTGGTCATATCTTGAGGACATGGAGAGGATTCTATCTGAAAATGAGGAACTGGCAACAAAATGA 2151 0.4096 MGMKIISVIPALDSHTPIFASSFTMELIKKRLKEHGIFVPSRLKVFRTRKKFMAGPFEIDPITVTHSIPDCCGLVLRCSDGTILHTGDWKIDETPLDGKVFDREALEELSKEGVTLMMSDSTNVLSPGRTTSESVVADALLRHISAAKGRVITTQFASNIHRLGSIKAAADLTGRKLVFVGMSLRTYLDAAWKDGKARIDPSTLIKAEDIDAYAPKDLLIVTTGSQAEPRAALNLASYGSSHSFKLTKEDVVLYSAKVIPGNESRVTDMLNRISEIGSTIVMGKNEYLHTSGHGYRGELEEVLRIVKPQHFLPIHGELLFLKEHELLGKSTGIRHTTVVKNGEMLGVSHLRNRRVLSNGFISLGTENLQLKYSDGDKAFGTSNDLLIDERMRIALDGIIVVSMEIFRPQNLDDQVGNTLKGKIRITTRCLWLDQGKLMDALHKAANAALSSCPVNCPLAHMERIVSEVLRKMVRKYSGKRPEVIAIAVENPSAVIEDEVKTKLSGKAHVDGISTWRRVLDGHGKENNSTKMQIRGVEGLASEEYTTTSSGDDDDISETEDQDEFWKSFVDSSSAEKSIKANNGYVPQKENKPQLKKDSSEESEEEMSETSNLESKYSKSAKRNKWKPEEIKKLIDMRGELHDRFQVVKGRMALWEEVSQNLSANGISRSPGQCKSLWTSLLQKYEEVKNEKNTKKKWSYLEDMERILSENEELATK 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02192 716 ProSiteProfiles Myb-like domain profile. 617 681 IPR001005 -
Arst1g02192 716 Gene3D - 251 360 IPR036866 -
Arst1g02192 716 CDD GT1 623 688 - -
Arst1g02192 716 MobiDBLite consensus disorder prediction 577 621 - -
Arst1g02192 716 Gene3D - 625 686 - -
Arst1g02192 716 MobiDBLite consensus disorder prediction 590 621 - -
Arst1g02192 716 PANTHER RIBONUCLEASE J 6 716 - -
Arst1g02192 716 PANTHER RIBONUCLEASE J 6 716 - -
Arst1g02192 716 MobiDBLite consensus disorder prediction 520 562 - -
Arst1g02192 716 Pfam Myb/SANT-like DNA-binding domain 622 706 IPR044822 -
Arst1g02192 716 SUPERFAMILY Metallo-hydrolase/oxidoreductase 15 345 IPR036866 -
Arst1g02192 716 Gene3D - 3 150 IPR036866 -
Arst1g02192 716 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 284 329 IPR011108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02192 Arst-Chr1 56325108 56332879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g02192 607 708 Trihelix Transcription Factor Family AT2G38250 29.808 5.25e-09 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Arst1g02192 Myb_DNA-bind_4 6.5e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02192 - - gmx:100814619 1168.68