Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02183 ATGGCGGCAGGGCGAGAAGGTGTTGTTCTGAGAAGAGAATCTTACAGAGAGAGTTCCATCAAGGAGCTTGATCACTGTAGGCATGGTTCTGTACAGAATGGGTTTCATGTTGGAAAAGAGGAGGAGAGAGAGGAAGGTGAGCTCTGTGTCGAACCTGGGGTGCGTGACTATGAACCTGCCTCAGGGTTTCAAGCAGTTGATGGAGATGAGGTCTTGCCACCACCGGAAAAGAGAAGAAAATTTTCTCCGATTGTGTGGGATCTACCAGAGAAGGAAGGAGTGATCCTCTCCAAAAAAGGGGCCACACAGGTTATTACTGTGTCTCACTCCTGTCCAACTCTGTTGAAAAGCCCGGTACAAGATGGTCGTTTGCATGGGGGTGTCTCTAGGATACCTCCACAAAATTCATCTTGTGTCTTGCAGTCAGGGCATGATGACCAAGAAGCAGATGAAGAGAACAATGCCCAAGGGTGGAACATCAAAATGTCTAGATGGGCTTCTGATGGTCAATCACCGGTGGGTGCTGTTGATGAATTTAATTTTGGCAAAGTGAAGCCAAGTCCTGAGATTGGTGAATTTCAAAGAGAATGTTCAGAAAGCACAATCACTAGATCCTCAGGAAGCAATGGACGAGATAATAGTGGGGGCCACTTTGATGGTAGTGATTCTGAAAAGGAATTCCCTACTGACTCCATGGTCGATGATGAGGAACAGAGTGATGTTGGTGATTATGCATGTGATTCTGATGAAGATGCCGGTTTAATGCACCTGCAGAGAAATATAAACATGCTTCAGAGTTGCAGAAGTGTGTGTGAGTTTGAAATGATTAAGAAAATCAACGAAGGAACTTATGGTGTTGTCTATAAGGCTAGGGATAAGAAGACCGGAGAAATAGTAGCATTGAAGAAGGTGAAGATGAATATAGAAAGGGATGGCTTTCCATTGTCATCCTTGAGGGAAATTAACATTCTCTTGTCTTTTGATCACCCCTCCATTGTGGATGTTAAAGAAGTAGTTGTGGATAATTATGATGGTACTTTCATGGTGATGGAGTACATGGAGCATGACCTTAAGGGACTGATGGAGGCAAAGAAACAGCCCTTCAGTATGGGTGAAATAAAATCTTTGATGCTGCAACTTCTTGAAGGTGTCAAGTATCTCCATGACAATTGGGTTCTCCATAGGGACTTAAAGACATCAAACATTCTGCTGAACGACAAGGGGGAGCTGAAAATATGTGACTTTGGGTTGTCCCGGCAGTTTGGAAGCCCACTGAAGCCATATACTCCTATTGTTGTGACACTATGGTACAGGGCTCCAGAGCTTTTGTTAGGAGCTAAGGAATATTCAACCGCAATTGACATGTGGTCAGTGGGTTGCATAATGGCTGAGTTGGTTGCCAAGGAACCTCTGTTCACGGGTAGAACAGAACTTGAACAAATTGATAAGATTTTTAGGACCCTGGGTACACCTGATGAGAAGATTTGGCCGGGCTTATCTAAATTACCTGGTCCTAAAGCAAAATTTGTTAAACAACCATGA 1542 0.4397 MAAGREGVVLRRESYRESSIKELDHCRHGSVQNGFHVGKEEEREEGELCVEPGVRDYEPASGFQAVDGDEVLPPPEKRRKFSPIVWDLPEKEGVILSKKGATQVITVSHSCPTLLKSPVQDGRLHGGVSRIPPQNSSCVLQSGHDDQEADEENNAQGWNIKMSRWASDGQSPVGAVDEFNFGKVKPSPEIGEFQRECSESTITRSSGSNGRDNSGGHFDGSDSEKEFPTDSMVDDEEQSDVGDYACDSDEDAGLMHLQRNINMLQSCRSVCEFEMIKKINEGTYGVVYKARDKKTGEIVALKKVKMNIERDGFPLSSLREINILLSFDHPSIVDVKEVVVDNYDGTFMVMEYMEHDLKGLMEAKKQPFSMGEIKSLMLQLLEGVKYLHDNWVLHRDLKTSNILLNDKGELKICDFGLSRQFGSPLKPYTPIVVTLWYRAPELLLGAKEYSTAIDMWSVGCIMAELVAKEPLFTGRTELEQIDKIFRTLGTPDEKIWPGLSKLPGPKAKFVKQP 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02183 513 MobiDBLite consensus disorder prediction 229 245 - -
Arst1g02183 513 ProSitePatterns Serine/Threonine protein kinases active-site signature. 392 404 IPR008271 GO:0004672|GO:0006468
Arst1g02183 513 PANTHER CELL DIVISION PROTEIN KINASE 272 503 - -
Arst1g02183 513 CDD STKc_CDC2L1 267 513 IPR045267 GO:0004674|GO:0005524|GO:0006468
Arst1g02183 513 Pfam Protein kinase domain 273 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g02183 513 MobiDBLite consensus disorder prediction 190 245 - -
Arst1g02183 513 Gene3D Phosphorylase Kinase; domain 1 256 354 - -
Arst1g02183 513 MobiDBLite consensus disorder prediction 130 152 - -
Arst1g02183 513 MobiDBLite consensus disorder prediction 194 216 - -
Arst1g02183 513 FunFam cyclin-dependent kinase G-2 isoform X1 258 354 - -
Arst1g02183 513 SUPERFAMILY Protein kinase-like (PK-like) 267 504 IPR011009 -
Arst1g02183 513 ProSiteProfiles Protein kinase domain profile. 273 513 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g02183 513 Gene3D Transferase(Phosphotransferase) domain 1 355 512 - -
Arst1g02183 513 SMART serkin_6 273 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g02183 513 FunFam Mitogen-activated protein kinase 353 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02183 Arst-Chr1 55837584 55840265 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g02183 268 503 Core Cell Cycle Gene Families AT5G10270 50.397 7.15e-79 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Arst1g02183 Pkinase 2.1e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02183 K08818 - gmx:100788840 656.751