Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02173 ATGGCATTTGTTTCCAATTACCCAAAAGAACTGGAGGAGATGAAACATGTAATAAAGCAGGAATTCATTGCATCACTGAGAAGGAAAAGTAGTGGCTTTTCCAGGCGAGCTTCCATATATAGAGGTGTGACCAGGCATCACCAACAAGGTAGGTGGCAAGTGAGAATTGGTTGTGTTGCTGGAAACAAAGATCTTTACTTGGGAACATTTGCAACTGAAGAGGAAGTTGCTGAGGCATATGATATAGCAGCTATAAAGTTCCGAGGTGCAAATGCAGTAACCAACTTTGAAATGAGCAGGTACGATGTTGATGCCATAATGAAGAGCTCTGTTCCTGTTGGTGGCGCGGCAAAACGCTTGAAACTCTCCCTAGAATCAGAGCAGAATTTATTTTGA 396 0.4242 MAFVSNYPKELEEMKHVIKQEFIASLRRKSSGFSRRASIYRGVTRHHQQGRWQVRIGCVAGNKDLYLGTFATEEEVAEAYDIAAIKFRGANAVTNFEMSRYDVDAIMKSSVPVGGAAKRLKLSLESEQNLF 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02173 131 Pfam AP2 domain 39 89 IPR001471 GO:0003700|GO:0006355
Arst1g02173 131 PRINTS Ethylene responsive element binding protein signature 79 99 IPR001471 GO:0003700|GO:0006355
Arst1g02173 131 PRINTS Ethylene responsive element binding protein signature 40 51 IPR001471 GO:0003700|GO:0006355
Arst1g02173 131 SUPERFAMILY DNA-binding domain 38 99 IPR016177 GO:0003677
Arst1g02173 131 ProSiteProfiles AP2/ERF domain profile. 39 97 IPR001471 GO:0003700|GO:0006355
Arst1g02173 131 FunFam AP2-like ethylene-responsive transcription factor 38 99 - -
Arst1g02173 131 CDD AP2 38 99 IPR001471 GO:0003700|GO:0006355
Arst1g02173 131 Gene3D AP2/ERF domain 39 99 IPR036955 GO:0003700|GO:0006355
Arst1g02173 131 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3 122 - -
Arst1g02173 131 SMART rav1_2 39 103 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02173 Arst-Chr1 53752382 53755518 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g02173 4 126 AP2-EREBP Transcription Factor Family AT5G10510 86.179 1.27e-61 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Arst1g02173 AP2 1.7e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02173 K09285 - adu:110280544 259.996