Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Arst1g02149 | ATGGATGGTAGAAGGCATTCAGTTGATATTCCAATTTCCAAAACTCTTGTGGCACTGAGGAGGGTGAGGTCACTGAGGGATCCATCAACTAACTGCATTAACAAGCTCTCTCCTTTGATTGACAATGTTCAATGGGAAAACGGTTCCAACAATGGCATTTCGCTGCACTTCCTCGAAGCTTCTCATGCATGCGGTTCTAGTGATAACAATGATGGTTTTAGATCAAAGACTTTAGAATTCAAGGGACATAGAGAGCAGGATACTGCTGATCTTGAGCTGAATTGTGGCCTTTTGAACTCTAAGAGGAACTATCATGGGATATCCTGCCATGAAACAAAGCGAGACGACGAGCTAGTTTATTCTAATGCTTATCAGCAAGGCATTGTTGGGAATAAATCACCGAGTGAAAGCTGTAGTAGCAACTATGGAGGTAGAGGGTTGGATCTGGCTGGCAAGGTGCCATCTGTTAATCATTTGAGGGACGGGGAATTGTGCTATTTATCTTCGCAGTTAGGGAGGGTAGATAACTTGAAGCAAACCCGAAAGTCGCAGCGCAGGACTACAAAAGTTAAACCATCTGAAGTAACAGGTGATACTGTGAGCCATGTAGGTAGTCCACACCTTTCTTTTGGTGATGCTCTCTCAGCTCATAGTGCTTCAGTACGAATAACTCAAGATGCTTTGGATAATCTACATGGATGTGGAATAAGCTGTTGTTGGTCAAAATCACCAAGATTTAGAGAATCAAATCATCATTCTGAAGTAGAAGATCTTCCTTTGTTATTGCAGCAAGCTAATGAGACTGATCTTTATGGATGCAGAAGCACAAGAAACGTAGGTGGCAGAGGTAGTCCAAATTTGGAAACTCCAAGAAGTTTATCAATGAAATTTAGGCCAAAATCTTTTGGTGATTTGGTGGGGCAAAATGTGGTTGGAAGGTCACTTATGGGGGCCATTTCCAGTGGAAGGATAACATCATTTTACCTTTTCCATGGTCCCCGTGGTACTGGAAAGACATCTGCGTCTAGGATATTTTCTGCGGCATTGAATTGCCTATCCCTTGAGGTGCAAAGGCCATGTGGTATGTGTAAAGAGTGTATTTCGCTCTTTTCTGGAAGAAGTAAAGATGTTAAGGAAGTGGATTCTTTGAGAATTAACCATGTAGACAAGGTTAAGTCCCTAATTAAGAGTGCTTGTATTCCTCCGGTTTCGTCACGCTTTAAGGTGTTCATTATCGATGAGTGCCAGTTCTTGAACGGGGAAACATGGGCTACTCTTTTGAATAGCCTAGATAATGTTTCTCAATATGTGGTTTTTGTGATGATCACCCCTGATTTGGATAACCTTCCTCGAAGTGTGGTTTCCCGGGCTCAGAGGTATCACTTTCCGAAGATTAAAGATGTTGATATCGCGAGCAGATTAAAAAAAATCTGTGTTGAAGAAGGTCTTGATTTTGAACAAGTTGCTTTGGATTTTATTGCTGCTAAATCTTGTGGTTCTCTTAGAGATGCAGAAATGATGCTTGATCAGCTGAGTTTGCTTGGTAAAAAAATCACACTTACCTTAGCCCATGAGCTCACTGGTGTCGTTTCAGATGATGAATTGCTTGACTTGTTGGACCTGGCTTTGTCATCTGACACTTCAAATACAGTTATAAGAGCCCGGGAGCTGATGAGATCGCGGATAGATCCATTACAACTTGTATCACAGCTTGCAAATCTTATTATGGATATTCTTGCAGGGAAGTCTGAAGTCGGTGATTCCGAAATCAGAAGAAGATTCTTGATTAGACAAACCTCTGAAGCAGACATGCAGAAATTGAGTCATGCGTTAAAAGTACTTTCAGAAACAGAGAAGCAATTGAGAATTTCAAAGAATCAAAGAACATGGTTCACAGCAGCGCTTCTACAATTAAGTGCCGAAGAATATCCACCTGCTGATGCAACTGATGACAAGTTGTATTTGAAAGGTGCTACCAATAGAGATGGTGATTTCTGTAGTACTTCATCAACAGGGGAGAGCTTGAAGAATATTGCTACAGGTCAATGTGATGAAAAGTCATATAGATTAGGATTGCAAGAGGATCAGAAAAGAACATTGGATTCCATATGGTATAAAGCTACAGAGATATGCCAATCGAGCCGGCTCAAGGCTTTTCTCAGGAAGCAGGGAAAGTTATCTTCGCTTTGTGTCAATCAAGGCCTTGCAGCTGCTGAGTTGGAATTCCACCGTCGTGACAGTGTAGCTAGAGCCGAGAAGTCGTGGAAACTGATCGCAAGTTACCTTCAGATCATATTGGGTTGCAACATTGAGCTCAGGATCAATTACGTACCTTGTGCCACAGCTTCTAGGTATGCCAGACTAAAGAGGTCATCTTTCAATTTCTTTAATTGTTCCCGAAGAATTCTACGGAAATCGATGCCTTCTGACGACCAAGGAAGCGAATCAGACTATGCTGATCAAACTTCTGAGAAGCCTATGATGAAAGATCAGACTCTAACTTGTTCCTCTGACTTTGGTTCTCGGGTGCCACTACCTGATGTTGTAGCAGCTTTGAGAAGTTGCGAAGGTAATCTGCTAAGCTCGGGGAAGACATTCTTGAATATGTCTACTCAAGAGACTCCAAGGAATTCATGTTCTAGAGCTGATTCTCTTAAGGAAGAGGAATTCAATCAGGCCCATTTACCTTCGTCAAACATCGATTTAGACTATCAATCTAAGTGTTTTCCTCGAACCTTCTGGCTTCATAAGAAATTCTATTCATCGCATGCATCGGAACAGAAGGATTTTGTTTTCTCAAGCCACTATGTTTATCCCCCACAACTCTAA | 2829 | 0.4171 | MDGRRHSVDIPISKTLVALRRVRSLRDPSTNCINKLSPLIDNVQWENGSNNGISLHFLEASHACGSSDNNDGFRSKTLEFKGHREQDTADLELNCGLLNSKRNYHGISCHETKRDDELVYSNAYQQGIVGNKSPSESCSSNYGGRGLDLAGKVPSVNHLRDGELCYLSSQLGRVDNLKQTRKSQRRTTKVKPSEVTGDTVSHVGSPHLSFGDALSAHSASVRITQDALDNLHGCGISCCWSKSPRFRESNHHSEVEDLPLLLQQANETDLYGCRSTRNVGGRGSPNLETPRSLSMKFRPKSFGDLVGQNVVGRSLMGAISSGRITSFYLFHGPRGTGKTSASRIFSAALNCLSLEVQRPCGMCKECISLFSGRSKDVKEVDSLRINHVDKVKSLIKSACIPPVSSRFKVFIIDECQFLNGETWATLLNSLDNVSQYVVFVMITPDLDNLPRSVVSRAQRYHFPKIKDVDIASRLKKICVEEGLDFEQVALDFIAAKSCGSLRDAEMMLDQLSLLGKKITLTLAHELTGVVSDDELLDLLDLALSSDTSNTVIRARELMRSRIDPLQLVSQLANLIMDILAGKSEVGDSEIRRRFLIRQTSEADMQKLSHALKVLSETEKQLRISKNQRTWFTAALLQLSAEEYPPADATDDKLYLKGATNRDGDFCSTSSTGESLKNIATGQCDEKSYRLGLQEDQKRTLDSIWYKATEICQSSRLKAFLRKQGKLSSLCVNQGLAAAELEFHRRDSVARAEKSWKLIASYLQIILGCNIELRINYVPCATASRYARLKRSSFNFFNCSRRILRKSMPSDDQGSESDYADQTSEKPMMKDQTLTCSSDFGSRVPLPDVVAALRSCEGNLLSSGKTFLNMSTQETPRNSCSRADSLKEEEFNQAHLPSSNIDLDYQSKCFPRTFWLHKKFYSSHASEQKDFVFSSHYVYPPQL | 942 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Arst1g02149 | 942 | PANTHER | REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT | 294 | 709 | - | - | |
| Arst1g02149 | 942 | Gene3D | - | 286 | 463 | IPR027417 | - | |
| Arst1g02149 | 942 | SUPERFAMILY | post-AAA+ oligomerization domain-like | 535 | 637 | IPR008921 | GO:0003677|GO:0006260 | |
| Arst1g02149 | 942 | MobiDBLite | consensus disorder prediction | 806 | 827 | - | - | |
| Arst1g02149 | 942 | MobiDBLite | consensus disorder prediction | 812 | 827 | - | - | |
| Arst1g02149 | 942 | NCBIfam | DNA polymerase III subunit gamma/tau | 292 | 638 | IPR012763 | GO:0003887|GO:0005524|GO:0006260|GO:0009360 | |
| Arst1g02149 | 942 | FunFam | DNA polymerase III subunit gamma/tau | 466 | 528 | - | - | |
| Arst1g02149 | 942 | FunFam | Protein STICHEL-like 1 isoform C | 529 | 642 | - | - | |
| Arst1g02149 | 942 | Pfam | DNA polymerase III, delta subunit | 308 | 465 | - | - | |
| Arst1g02149 | 942 | Gene3D | - | 467 | 528 | - | - |
Showing 1 to 10 of 14 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Arst1g02149 | - | - | gmx:100819111 | 1145.95 |
Showing 1 to 1 of 1 entries