Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02147 ATGGATGGTAGAAGGCATTCAGTTGATATTCCAATTTCCAAAACTCTTGTGGCACTGAGGAGGGTGAGGTCACTGAGGGATCCATCAACTAACTGCATTAACAAGCTCTCTCCTTTGATTGACAATGTTCAATGGGAAAACGGTTCCAACAATGGCATTTCGCTGCACTTCCTCGAAGCTTCTCATGCATGCGGTTCTAGTGATAACAATGATGGTTTTAGATCAAAGACTTTAGAATTCAAGGGACATAGAGAGCAGGATACTGCTGATCTTGAGCTGAATTGTGGCCTTTTGAACTCTAAGAGGAACTATCATGGGATATCCTGCCATGAAACAAAGCGAGACGACGAGCTAGTTTATTCTAATGCTTATCAGCAAGGCATTGTTGGGAATAAATCACCGAGTGAAAGCTGTAGTAGCAACTATGGAGGTAGAGGGTTGGATCTGGCTGGCAAGGTGCCATCTGTTAATCATTTGAGGGACGGGGAATTGTGCTATTTATCTTCGCAGTTAGGGAGGGTAGATAACTTGAAGCAAACCCGAAAGTCGCAGCGCAGGACTACAAAAGTTAAACCATCTGAAGTAACAGGTGATACTGTGAGCCATGTAGGTAGTCCACACCTTTCTTTTGGTGATGCTCTCTCAGCTCATAGTGCTTCAGTACGAATAACTCAAGATGCTTTGGATAATCTACATGGATGTGGAATAAGCTGTTGTTGGTCAAAATCACCAAGATTTAGAGAATCAAATCATCATTCTGAAGTAGAAGATCTTCCTTTGTTATTGCAGCAAGCTAATGAGACTGATCTTTATGGATGCAGAAGCACAAGAAACGTAGGTGGCAGAGGTAGTCCAAATTTGGAAACTCCAAGAAGTTTATCAATGAAATTTAGGCCAAAATCTTTTGGTGATTTGGTGGGGCAAAATGTGGTTGGAAGGTCACTTATGGGGGCCATTTCCAGTGGAAGGATAACATCATTTTACCTTTTCCATGGTCCCCGTGGTACTGGAAAGACATCTGCGTCTAGGATATTTTCTGCGGCATTGAATTGCCTATCCCTTGAGGTGCAAAGGCCATGTGGTATGTGTAAAGAGTGTATTTCGCTCTTTTCTGGAAGAAGTAAAGATGTTAAGGAAGTGGATTCTTTGAGAATTAACCATGTAGACAAGGTTAAGTCCCTAATTAAGAGTGCTTGTATTCCTCCGGTTTCGTCACGCTTTAAGGTGTTCATTATCGATGAGTGCCAGTTCTTGAACGGGGAAACATGGGCTACTCTTTTGAATAGCCTAGATAATGTTTCTCAATATGTGGTTTTTGTGATGATCACCCCTGATTTGGATAACCTTCCTCGAAGTGTGGTTTCCCGGGCTCAGAGGTATCACTTTCCGAAGATTAAAGATGTTGATATCGCGAGCAGATTAAAAAAAATCTGTGTTGAAGAAGGTCTTGATTTTGAACAAGTTGCTTTGGATTTTATTGCTGCTAAATCTTGTGGTTCTCTTAGAGATGCAGAAATGATGCTTGATCAGCTGAGTTTGCTTGGTAAAAAAATCACACTTACCTTAGCCCATGAGCTCACTGGTGTCGTTTCAGATGATGAATTGCTTGACTTGTTGGACCTGGCTTTGTCATCTGACACTTCAAATACAGTTATAAGAGCCCGGGAGCTGATGAGATCGCGGATAGATCCATTACAACTTGTATCACAGCTTGCAAATCTTATTATGGATATTCTTGCAGGGAAGTCTGAAGTCGGTGATTCCGAAATCAGAAGAAGATTCTTGATTAGACAAACCTCTGAAGCAGACATGCAGAAATTGAGTCATGCGTTAAAAGTACTTTCAGAAACAGAGAAGCAATTGAGAATTTCAAAGAATCAAAGAACATGGTTCACAGCAGCGCTTCTACAATTAAGTGCCGAAGAATATCCACCTGCTGATGCAACTGATGACAAGTTGTATTTGAAAGGTGCTACCAATAGAGATGGTGATTTCTGTAGTACTTCATCAACAGGGGAGAGCTTGAAGAATATTGCTACAGGTCAATGTGATGAAAAGTCATATAGATTAGGATTGCAAGAGGATCAGAAAAGAACATTGGATTCCATATGGTATAAAGCTACAGAGATATGCCAATCGAGCCGGCTCAAGGCTTTTCTCAGGAAGCAGGGAAAGTTATCTTCGCTTTGTGTCAATCAAGGCCTTGCAGCTGCTGAGTTGGAATTCCACCGTCGTGACAGTGTAGCTAGAGCCGAGAAGTCGTGGAAACTGATCGCAAGTTACCTTCAGATCATATTGGGTTGCAACATTGAGCTCAGGATCAATTACGTACCTTGTGCCACAGCTTCTAGGTATGCCAGACTAAAGAGGTCATCTTTCAATTTCTTTAATTGTTCCCGAAGAATTCTACGGAAATCGATGCCTTCTGACGACCAAGGAAGCGAATCAGACTATGCTGATCAAACTTCTGAGAAGCCTATGATGAAAGATCAGACTCTAACTTGTTCCTCTGACTTTGGTTCTCGGGTGCCACTACCTGATGTTGTAGCAGCTTTGAGAAGTTGCGAAGGTAATCTGCTAAGCTCGGGGAAGACATTCTTGAATATGTCTACTCAAGAGACTCCAAGGAATTCATGTTCTAGAGCTGATTCTCTTAAGGAAGAGGAATTCAATCAGGCCCATTTACCTTCGTCAAACATCGATTTAGACTATCAATCTAAGTGTTTTCCTCGAACCTTCTGGCTTCATAAGAAATTCTATTCATCGCATGCATCGGAACAGAAGGATTTTGTTTTCTCAAGCCACTATGTTTATCCCCCACAACTCTAA 2829 0.4171 MDGRRHSVDIPISKTLVALRRVRSLRDPSTNCINKLSPLIDNVQWENGSNNGISLHFLEASHACGSSDNNDGFRSKTLEFKGHREQDTADLELNCGLLNSKRNYHGISCHETKRDDELVYSNAYQQGIVGNKSPSESCSSNYGGRGLDLAGKVPSVNHLRDGELCYLSSQLGRVDNLKQTRKSQRRTTKVKPSEVTGDTVSHVGSPHLSFGDALSAHSASVRITQDALDNLHGCGISCCWSKSPRFRESNHHSEVEDLPLLLQQANETDLYGCRSTRNVGGRGSPNLETPRSLSMKFRPKSFGDLVGQNVVGRSLMGAISSGRITSFYLFHGPRGTGKTSASRIFSAALNCLSLEVQRPCGMCKECISLFSGRSKDVKEVDSLRINHVDKVKSLIKSACIPPVSSRFKVFIIDECQFLNGETWATLLNSLDNVSQYVVFVMITPDLDNLPRSVVSRAQRYHFPKIKDVDIASRLKKICVEEGLDFEQVALDFIAAKSCGSLRDAEMMLDQLSLLGKKITLTLAHELTGVVSDDELLDLLDLALSSDTSNTVIRARELMRSRIDPLQLVSQLANLIMDILAGKSEVGDSEIRRRFLIRQTSEADMQKLSHALKVLSETEKQLRISKNQRTWFTAALLQLSAEEYPPADATDDKLYLKGATNRDGDFCSTSSTGESLKNIATGQCDEKSYRLGLQEDQKRTLDSIWYKATEICQSSRLKAFLRKQGKLSSLCVNQGLAAAELEFHRRDSVARAEKSWKLIASYLQIILGCNIELRINYVPCATASRYARLKRSSFNFFNCSRRILRKSMPSDDQGSESDYADQTSEKPMMKDQTLTCSSDFGSRVPLPDVVAALRSCEGNLLSSGKTFLNMSTQETPRNSCSRADSLKEEEFNQAHLPSSNIDLDYQSKCFPRTFWLHKKFYSSHASEQKDFVFSSHYVYPPQL 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02147 942 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 294 709 - -
Arst1g02147 942 Gene3D - 286 463 IPR027417 -
Arst1g02147 942 SUPERFAMILY post-AAA+ oligomerization domain-like 535 637 IPR008921 GO:0003677|GO:0006260
Arst1g02147 942 MobiDBLite consensus disorder prediction 806 827 - -
Arst1g02147 942 MobiDBLite consensus disorder prediction 812 827 - -
Arst1g02147 942 NCBIfam DNA polymerase III subunit gamma/tau 292 638 IPR012763 GO:0003887|GO:0005524|GO:0006260|GO:0009360
Arst1g02147 942 FunFam DNA polymerase III subunit gamma/tau 466 528 - -
Arst1g02147 942 FunFam Protein STICHEL-like 1 isoform C 529 642 - -
Arst1g02147 942 Pfam DNA polymerase III, delta subunit 308 465 - -
Arst1g02147 942 Gene3D - 467 528 - -
Arst1g02147 942 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 318 514 IPR027417 -
Arst1g02147 942 Gene3D - 529 641 - -
Arst1g02147 942 CDD HLD_clamp_pol_III_gamma_tau 465 528 IPR045085 -
Arst1g02147 942 MobiDBLite consensus disorder prediction 180 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02147 Arst-Chr1 52166003 52171715 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g02147 284 621 Core DNA Replication Machinery Family AT1G21690 26.176 3.33e-15 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02147 - - gmx:100819111 1145.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g02147 1 52166003 52171715 Arst1g02147 1 52166003 52171715 ECH