Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02116 ATGGCGACCGTCCCTCCCATCTCTGTCATGAGCTTTCATCTCAATCGTGCTTCTCTCTCTCACTCCACTGTGAATCTCTCTCTTCCCTTCATGCTCGATGGCGACGGCGACGGTGGCGAGGCCCCCAGCCGGTGCCCAAGGCCAATCGCAGCCCTTCCTAATGAGTTCAACCCCAGTTATCTAAAAATATATTACAATAAGCTGTTTCCTCATGCTGATTTATATAGATGGATGTCATACGGCAACGATGGGAAGCATCCTGCTTGTGATTCATCTTACTTGGGACGAAGGAAATTCTCGTACACCCTAGATAACGATATATTTGTGCGCTACAATACCTTCAATAGTGCCGCCGAACTTGAAAACTCCATCAAAGACAAGTGCCCGTTAAAGATAGATATTGGACCCATCTACAACCTCAATATAAGATATGAAAGCTTGAATGCTTCTGCTGGAGATAATGTTCTCACTCCGGTTGAGAGGGAGCTGATTTTTGATATAGATATGTCAGATTATGATGATGTTAGATACTGCTGCTCAGGTGCTGATGTTTGTCTCAATTGCTGGCCATTAATGATTGTAGCTGTCAAAGTAATAGATACTTCCTTAAGAGATGACTTTGGGTTTAGACATATTCTCTGGGTATATAGTGGTCGGCGTGGTGTACATTGTTGGGTCTGTGATAGAAAGGCAAGACGGTTGACTAATGAGCAGAGAGCAGCAGTTGCGGACTATTTTCGTGTCTACAAGGAAAATGAAAATAACTATAAGAAGGTTTCCTTGATGGGTCAAGTTCTGCATCCCTTTCTGGCGAGATCATATACTGAAGTTCTCAAGGAATATTTTGAGACAAAACTGCTTACAAGTCAAAATTTACTTTCTAGCAAGGAGAGATATGAAAAGATCCTAGAGATGATTCCTGATCAATCTATTGCTTCTGAACTTCGAGGAAAGTGGCAAGAAAGTAGGCGGTCTTCTAGTGCAAAAGAAGACATTAATATTGTTCAATGGGAGCAGCTTAAACAGTTGCTGCAAAAACATAAGGCACAAGGGGTGCGTAGGTGTGTTGAAGAGATTGTGTTCACCTATACATATCCTAGGCTTGATATGGAGGTTTCTAAACATATGAACCATTTGCTCAAAGCACCCTTCTGTGTGCACCCAAAAATAGGCCGTGTTTGTGTCCCCATCAACCCAAATAATTGTGAAGAATTTGATCCCACGACGGTGCCAACCCTTATCCAGCTTTTGGAAGAGCTGAATAGGGAGGGCTTGAGGTCTGATGTTGAAGGAGAATGGAATAAAACTTCACTTGCAAATGCCATCAAGCTCTTTAGGTCATCCTTCCTCCAGCCATTACTGAAAATTTGCAAGGAGGAATTGGAAAGCTCCTATAATGCGAAACTACAGCAGTCGAAGAATCTGCTTAGTTGGTAG 1437 0.4273 MATVPPISVMSFHLNRASLSHSTVNLSLPFMLDGDGDGGEAPSRCPRPIAALPNEFNPSYLKIYYNKLFPHADLYRWMSYGNDGKHPACDSSYLGRRKFSYTLDNDIFVRYNTFNSAAELENSIKDKCPLKIDIGPIYNLNIRYESLNASAGDNVLTPVERELIFDIDMSDYDDVRYCCSGADVCLNCWPLMIVAVKVIDTSLRDDFGFRHILWVYSGRRGVHCWVCDRKARRLTNEQRAAVADYFRVYKENENNYKKVSLMGQVLHPFLARSYTEVLKEYFETKLLTSQNLLSSKERYEKILEMIPDQSIASELRGKWQESRRSSSAKEDINIVQWEQLKQLLQKHKAQGVRRCVEEIVFTYTYPRLDMEVSKHMNHLLKAPFCVHPKIGRVCVPINPNNCEEFDPTTVPTLIQLLEELNREGLRSDVEGEWNKTSLANAIKLFRSSFLQPLLKICKEELESSYNAKLQQSKNLLSW 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02116 478 NCBIfam eukaryotic-type DNA primase catalytic subunit PriS 62 419 IPR014052 GO:0003896|GO:0006269
Arst1g02116 478 PANTHER DNA PRIMASE SMALL SUBUNIT 53 460 - -
Arst1g02116 478 SUPERFAMILY Prim-pol domain 56 421 - -
Arst1g02116 478 Pfam DNA primase small subunit 165 398 IPR002755 GO:0003896|GO:0006269
Arst1g02116 478 FunFam DNA primase 48 459 - -
Arst1g02116 478 Gene3D DNA primase, PRIM domain 47 459 - -
Arst1g02116 478 CDD AE_Prim_S 70 407 IPR014052 GO:0003896|GO:0006269
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02116 Arst-Chr1 50121762 50135957 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g02116 46 478 Core DNA Replication Machinery Family AT5G41880 63.303 0.0 596
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02116 K02684 - qsa:O6P43_034334 704.901