LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst1g02106	ATGGCGGTCCACGACGGAGGAGAACGCGGGATTGAACGGCATGGAAGCACAGATCGAGATCTGGCTGTCTCGAGGTTCACAATAAGGGAAGAAAATGGATCACACAGGGCAACGAGATTCACAGGAGAGGATGCTGATGATGGAATGAGCGGCAAAACTTTGCCGGTAGAGAAAGCAGAAGTGATGGATTCGTCCGCCGCAGATGCGGACATAGATGCAGAAGCAGCAGTGAGGATTGTTGATGGGATAGGGTACTTTGGCGCCATTGAATTTTCTACCCTGACAGCCAAGGACGTCCTTATGACGGAGTTCACAAGTCTACAGGGAGCTTATGACTACTACAACGAATACGGTCGCATCAAGGGAATTTCGGTTAGGAGGTCCAAGGTGGGTCACAGAACAAAGCAGGGGGCGGAGGGCGAAATCATTTGGCAGATATTTGTGTGCTCGAGGGAAGGAGAGCGAGACGGGAAACACATGCAGCGGGAAGACAGGAAGATGGATCCTCAACCGATCACGCGGTGCGGGTGTGAAGCCCGGATTAAGGTCCACGTCGATGATGCCATCAGGCGATGGTTTGTTGAACAATTATGCGATAACCATAATCATCCCATGCTGGATGCGAGGTTCAAGGGTCTGTCGCGGTCACACAGAGCAGTCAAGGAAGGCGATTTGCACCAAATCAATTCCATGAGAAAATCCGGGTTGCGGGTGCCGACGATTTTCCGCGCCTTTGCCAATCAGTCAGGAGGATTCGAGACTGTTGGGTTCGAGATAAAGGACATATATAATGCGATAGAGAAGCAAAGGCGGAAGTACTCGTTGGCTGTTGGCAAGAGGCTGGAAAATCTCTTCTGGTGCGATGGTACAAGTTGTTATGACTACAGTGTATTCGGGGATGTCCTGGGTTTTGATGCAACGTACGGTCATAACAAATACAAGTGCCCTTTGGTAATATTCTCAGGGGTGGACCATCATATAAGGACGGTGGTGTTTGGCTGCGCCATCTTGAGCAACGAGAGTGAAGGAAGCTATGTGTGGTTGTTGTGGTCATTTCTTGAGGCAATGAAAGGAAAACAGTCGAAGTCTGCCATCACGGACGGGGATCTCACCATAAAGAGTGCGGTTAGCACAGTTTTCCCTGGTGCACATCACAGGCTGTGTAGCTAG	1170	0.5034	MAVHDGGERGIERHGSTDRDLAVSRFTIREENGSHRATRFTGEDADDGMSGKTLPVEKAEVMDSSAADADIDAEAAVRIVDGIGYFGAIEFSTLTAKDVLMTEFTSLQGAYDYYNEYGRIKGISVRRSKVGHRTKQGAEGEIIWQIFVCSREGERDGKHMQREDRKMDPQPITRCGCEARIKVHVDDAIRRWFVEQLCDNHNHPMLDARFKGLSRSHRAVKEGDLHQINSMRKSGLRVPTIFRAFANQSGGFETVGFEIKDIYNAIEKQRRKYSLAVGKRLENLFWCDGTSCYDYSVFGDVLGFDATYGHNKYKCPLVIFSGVDHHIRTVVFGCAILSNESEGSYVWLLWSFLEAMKGKQSKSAITDGDLTIKSAVSTVFPGAHHRLCS	389

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst1g02106	389	PANTHER	OS01G0519700 PROTEIN	280	389	-	-
	Arst1g02106	389	Pfam	FAR1 DNA-binding domain	112	206	IPR004330	-
	Arst1g02106	389	Pfam	MULE transposase domain	301	388	IPR018289	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst1g02106	Arst-Chr1	49503947	49518219	Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Arst1g02106		FAR1	6.5e-17	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst1g02106	-		-	adu:107488784	782.326