Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02105 ATGGCTGCTTCTGCTTCTTCTTCTTTGTCTTCATCTTCTAAGAAGGATTCAGTGTACCGCGGAATCCGGTGCCGAGGAGGGAAATGGGTATCCGAGATCCGAGAGCCGAGAAAGACGACCCGAATATGGCTCGGCACCTTTCTGAAGCCGGAGATGGCTGCGGCAGCCTATGACGTGGCAGCACTGGCACTCAAGGGTGCAGAAGCACCCTTGAACTTCCCTGCCATGGTAGGGAAGTATCCAATGCCAGCGTCTAGTTCCGCAGCTGACATCCGCAGCGCTGCCACCGCCGCGGCGCAGCTGATTATGGCTGAACTTGCATCACCAACCAACAATAATGCAGTTCAGCCTAATATTGATAATGAAAACAATAATAATAATAATAATAATAATAATAATAATAATGATAATGACAACAATAACACTAATAATGATAGTGCTGCTCCTTTGTATGATGATGGACCGGTTGAGTTTTTGGACGAAGAAGCAATTTTCTCCTTGCCGAGTTTGCTGGTCGATATGGCAGAGGGAATGCTGCTTTCTCCACCCAGAATGAGTCCGTCGTCGCCCGACTCGCCGGAAAATTATTCCGGCGGAGGAGACAGTTTGTGGAACTACTAA 621 0.4815 MAASASSSLSSSSKKDSVYRGIRCRGGKWVSEIREPRKTTRIWLGTFLKPEMAAAAYDVAALALKGAEAPLNFPAMVGKYPMPASSSAADIRSAATAAAQLIMAELASPTNNNAVQPNIDNENNNNNNNNNNNNNDNDNNNTNNDSAAPLYDDGPVEFLDEEAIFSLPSLLVDMAEGMLLSPPRMSPSSPDSPENYSGGGDSLWNY 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02105 206 Gene3D AP2/ERF domain 18 76 IPR036955 GO:0003700|GO:0006355
Arst1g02105 206 ProSiteProfiles AP2/ERF domain profile. 18 74 IPR001471 GO:0003700|GO:0006355
Arst1g02105 206 MobiDBLite consensus disorder prediction 179 206 - -
Arst1g02105 206 MobiDBLite consensus disorder prediction 190 206 - -
Arst1g02105 206 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Arst1g02105 206 PRINTS Ethylene responsive element binding protein signature 56 76 IPR001471 GO:0003700|GO:0006355
Arst1g02105 206 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 7 178 - -
Arst1g02105 206 CDD AP2 17 75 IPR001471 GO:0003700|GO:0006355
Arst1g02105 206 SMART rav1_2 18 80 IPR001471 GO:0003700|GO:0006355
Arst1g02105 206 MobiDBLite consensus disorder prediction 112 148 - -
Arst1g02105 206 Pfam AP2 domain 17 66 IPR001471 GO:0003700|GO:0006355
Arst1g02105 206 MobiDBLite consensus disorder prediction 112 153 - -
Arst1g02105 206 SUPERFAMILY DNA-binding domain 17 75 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02105 Arst-Chr1 49471727 49472500 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g02105 5 206 AP2-EREBP Transcription Factor Family AT5G52020 48.544 2.45e-46 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Arst1g02105 AP2 1.2e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02105 - - adu:107489031 315.849