Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02075 ATGGGAAGGCAACCTTGTTGTGATAAACTTGGTGTGAAGAAAGGACCATGGACTGCTGAGGAAGACAAGAAGCTTATAAACTTTATTCTCACAAATGGACAGTGCTGCTGGCGTGCTGTGCCCAAGCTGGCCGGCCTCCGCCGATGCGGCAAGAGCTGCCGCCTTCGCTGGACTAATTACCTTCGCCCGGACTTAAAGAGAGGACTCCTCACTCAGGCAGAGGAGCAGCTTGTTATTGATCTTCATGCCCGTCTTGGCAACAGGTGGTCCAAGATTGCAGCAAGGTTACCAGGAAGAACAGACAATGAGATCAAGAATCATTGGAACACACACATCAAGAAAAAGCTTCTTAAGATGGGGATTGACCCTGTCACTCATGTACCTCTCAATAAAAAGGAAAGTTCCTCCCCTGAAGACCAAAAGAATCTGCAACAACAAGAGCCTAAGGAAGGTAATAATGGGGATCTCAACTCTGAGGAAAATAATTCAAATTCATCATCCCCAACTGAAAATTCTTCTTCAGGAGAAGAATCTCTTTTGCTAGATAGCATTTGCAGCGATGATTCTCTAATGATGGATAATTTATGGATGGATCATGAAAATACACTGGTGGATGCATTGTTATGGGACACTACCCCTAAAGTGGAGGGCACAAATACAAACACAAACAATGTTGACATGGGACTCACAGTGCCATCTTGGGAGGATAATAATAATTATGCTTGGTTATTGGACTTTGAGGACATTGGTGTTCATGATTTTGGTTTTAATTATTGTTTCAATGAGATAGATCATTCAAATGCAATGCAAACTATAGGAAGTGAAAGAAAAGGGTCTTTAGCGTGA 846 0.4279 MGRQPCCDKLGVKKGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNYLRPDLKRGLLTQAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLLKMGIDPVTHVPLNKKESSSPEDQKNLQQQEPKEGNNGDLNSEENNSNSSSPTENSSSGEESLLLDSICSDDSLMMDNLWMDHENTLVDALLWDTTPKVEGTNTNTNNVDMGLTVPSWEDNNNYAWLLDFEDIGVHDFGFNYCFNEIDHSNAMQTIGSERKGSLA 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02075 281 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Arst1g02075 281 Gene3D - 70 172 - -
Arst1g02075 281 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Arst1g02075 281 Pfam Myb-like DNA-binding domain 71 111 IPR001005 -
Arst1g02075 281 FunFam MYB transcription factor 11 67 - -
Arst1g02075 281 CDD SANT 16 61 IPR001005 -
Arst1g02075 281 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Arst1g02075 281 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Arst1g02075 281 MobiDBLite consensus disorder prediction 139 177 - -
Arst1g02075 281 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Arst1g02075 281 SMART sant 13 63 IPR001005 -
Arst1g02075 281 SMART sant 66 114 IPR001005 -
Arst1g02075 281 MobiDBLite consensus disorder prediction 127 177 - -
Arst1g02075 281 CDD SANT 71 112 IPR001005 -
Arst1g02075 281 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Arst1g02075 281 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 201 - -
Arst1g02075 281 Gene3D - 12 67 - -
Arst1g02075 281 FunFam MYB transcription factor 70 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02075 Arst-Chr1 48153457 48155554 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g02075 1 256 MYB Transcription Factor Family AT4G22680 58.182 5.88e-98 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst1g02075 Myb_DNA-binding 3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02075 K09422 - gmx:100786965 376.326