Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02041 ATGGAGTCAAGCGCCGGCGGCATCAGCGGCGGCGTTACGGTGGTCGGATCAGATGCTCCGTCGGAGTATCAAATAGCTCCGAGGACAGAGAACCCTTCTCCAGCAGGAGGATCGGCCGCGCCAATCCCTGCGCCAGCTCCGACGAACCAAGGCGGTGCTCTGCCGCATCCTCCGCCACATATGGCGAAGATGACATCGCCTCCGGCAACAGCGCCGGGGAAGAAGAAGAGAGGGCGGCCCAGAAAGTATGGCCCAGACGGGTCAGTGGTGGCGCTGTCCCCAAAGCCAATATCGTCTTCGGCACCGCTGGCGTTGCCGCCGGTGATCGATTTCTCGGCGGAGACGAAGCGCGGGAAGGTGAAGGCAGCTGGTACCGTGAGCAGAGCCAAGTTTGAGGTTGAGAATTTAGGTGAATGGGTTGCATGCTCGGTTGGTGCTAATTTCACACCCCATTTCATCACTGTTAATCCTGGGGAGGATGTTACTATGAAGGTAATATCATTTTCTCAGCAAGGCCCACGAGCTATATGCATTTTGTCAGCAAATGGAGTCATATCAAGTGTTACACTTCGTCAGCCTGATTCTTCTGGTGGCACATTGACGTATGAGGGACGTTTTGAAATTCTATCTCTAAGCGGCTCGTTCACACCAAGTGAAACTGCAGGAACACGAAGCAGATCGGGTGGCATGAGTGTCTCTTTAGCAGGTCCAGATGGACGAGTTATAGGTGGTGGAGTCGCTGGTCTATTGGTGGCTGCAAGTCCCGTGCAGGTAGTGGTTGGAAGTTTTCTAGCAGGGAACCAACATGAGCAAAAGCCAAGAAAACCAAAACCTAATATTATAGCATCAACTGTGATGCCGGCTGCGAGTGTTCCTGTGTCAACGGCCGATCCAGTTGCTGTTCTGCAATCGCAGGCTTCCTTCCGAGGAGATAGTTGGTCTGCTGTTCCTGCAGATGTGAATAAGAACAAGCCGGCTGACATTAATGTGTCGCTTCCTGGAGGGTAA 1008 0.5347 MESSAGGISGGVTVVGSDAPSEYQIAPRTENPSPAGGSAAPIPAPAPTNQGGALPHPPPHMAKMTSPPATAPGKKKRGRPRKYGPDGSVVALSPKPISSSAPLALPPVIDFSAETKRGKVKAAGTVSRAKFEVENLGEWVACSVGANFTPHFITVNPGEDVTMKVISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFTPSETAGTRSRSGGMSVSLAGPDGRVIGGGVAGLLVAASPVQVVVGSFLAGNQHEQKPRKPKPNIIASTVMPAASVPVSTADPVAVLQSQASFRGDSWSAVPADVNKNKPADINVSLPGG 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02041 335 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 45 301 IPR039605 GO:0003680
Arst1g02041 335 ProSiteProfiles PPC domain profile profile. 145 288 IPR005175 -
Arst1g02041 335 FunFam AT-hook motif nuclear-localized protein 1-like 150 280 - -
Arst1g02041 335 CDD DUF296 149 263 IPR005175 -
Arst1g02041 335 MobiDBLite consensus disorder prediction 48 65 - -
Arst1g02041 335 SUPERFAMILY AF0104/ALDC/Ptd012-like 147 266 - -
Arst1g02041 335 MobiDBLite consensus disorder prediction 1 94 - -
Arst1g02041 335 Gene3D - 150 278 - -
Arst1g02041 335 Pfam Plants and Prokaryotes Conserved (PCC) domain 150 263 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02041 Arst-Chr1 45636655 45642221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g02041 4 332 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 58.621 1.26e-124 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02041 - - gmx:100801730 430.254