Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02029 ATGGATCCAATTACAACATCATCTTCACAAGGGCGTTCTCTTCCCCCACCTTTCAACACACCAAGAGATCTCCAACTTCATCACTTTTCCAAGAAGGAGACAGACACAGAAACAGGCGAAGAATCTGAAATAACAAGAAGGCCACGCGGTAGACCCGCGGGATCCAAGAACAAGCCAAAACCACCCATCATCATCACGCGCGACAGCGCCAACGCGCTCCGCACGCACGTCATGGAAGTCGCAGACGGCTGCGACATCGTCGAGAGCATCTCCGCCTTCACGCGGAGGCGCCAAAGGGGCGTGTGCATCATGAGTGGCACCGGCACGGTAGCCAACGTCACTCTCCGCCAACCGGCTTCAAGCAACGCGGTCGTGACGCTCCAAGGGAGGTTCGAGATCTTGTCACTGGCGGGGTCGTTCCTGCCGGCGCCGGCTCCACCGGAAGCGTCACGGTTGACGATATACTTGGCCGGGGGGCAAGGGCAGGTGGTGGGAGGGAGTGTTGTTGGGACGCTGGTGGCTTCGGGGATTGTAGTGATCATGGCTGCTTCTTTTGGTAACGCTGCTTATGAGAAGCTTCCGTTGGAGGAAGATGACAACAATGGTGATGCTGCCATGTTGGCACTGCAAGAAGGGGTTTCTTCTTCCATGGATTCCCCTGGGGCTAGTAGTAGTGTTCAGCATCAGCAGCAACATTATTCTTCACAAACACAGCTTTTGAGGGATGTAACTGCAACTCATCAACTTTTCCATCATGCTGGTTTGGTCAACGCTCCTAATATTGTGGGTTCTTCCATTCATCATCAGATGCCTTCTGATCAAGATTTTTGGGCTTCTGGGCGCCCTCCATTCTGA 855 0.5392 MDPITTSSSQGRSLPPPFNTPRDLQLHHFSKKETDTETGEESEITRRPRGRPAGSKNKPKPPIIITRDSANALRTHVMEVADGCDIVESISAFTRRRQRGVCIMSGTGTVANVTLRQPASSNAVVTLQGRFEILSLAGSFLPAPAPPEASRLTIYLAGGQGQVVGGSVVGTLVASGIVVIMAASFGNAAYEKLPLEEDDNNGDAAMLALQEGVSSSMDSPGASSSVQHQQQHYSSQTQLLRDVTATHQLFHHAGLVNAPNIVGSSIHHQMPSDQDFWASGRPPF 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02029 284 MobiDBLite consensus disorder prediction 213 236 - -
Arst1g02029 284 Pfam Plants and Prokaryotes Conserved (PCC) domain 74 186 IPR005175 -
Arst1g02029 284 SUPERFAMILY AF0104/ALDC/Ptd012-like 70 199 - -
Arst1g02029 284 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 33 278 IPR014476 GO:0003680
Arst1g02029 284 ProSiteProfiles PPC domain profile profile. 70 210 IPR005175 -
Arst1g02029 284 MobiDBLite consensus disorder prediction 25 50 - -
Arst1g02029 284 MobiDBLite consensus disorder prediction 1 64 - -
Arst1g02029 284 MobiDBLite consensus disorder prediction 1 16 - -
Arst1g02029 284 Gene3D - 73 201 - -
Arst1g02029 284 FunFam AT-hook motif nuclear-localized protein 73 200 - -
Arst1g02029 284 CDD DUF296 74 147 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02029 Arst-Chr1 45202434 45204099 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g02029 41 284 AT-hook Motif Nuclear Localized (AHL) Family AT4G22810 56.680 6.04e-71 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02029 - - gmx:100802044 308.145