Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02027 ATGGGTAAGCCACTTAAGGATCTAACAGCAACTAAAAGAAAGGAATTTGAGGATTATTTTTTGATGCGAGAGTTGCTCATGGGAATATATGAGAAGGTTTTTGAAAGGCCTTCTCCTATCCAAGAAGAAAGCATTCCAATTGCTCTTACTGGTAGTGACATTCTTGAAATGGCTAAAAGTGGGACAGGCAAAAAAGCTGCATTTTGCATTCCTACATTGGAAAAAATTGACCAGGATAATAATGTTGATAAGCTTTTGTCCCCAGAAGTCCAACCTTCTATAGTTGTTATTAATTTTTATTTTCCCAAGAATTTAGAAACTTATCTCCACAGGGTCGGTCGCTCAGGGTGGTTTGGGCATATTGGTTTAGCAGTTAACTTGATCACTTATTGCGACCACTTTAATTTGATTGAACAAGAATTTGGAATTAAAATAAAGCAAATTCCACCATACATTGACCAGATTATTCGTGAAGTGTATTGTGGAGCTTTCCATTTGGTTCCTTTATCCGATGAAGGCCTTGATCTAACAGCAACTAAAAGAAAGGAATTTGAGGATTATTTTTTGATGCGAGAGTTGCTCATGGGAATATATGAGAAGGTTTTTGAAAGGCCTTCTCCTATCCAAGAAGAAAGCATTCCAATTGCTCTTACTGGTAGTGACATTCTTGAAAGGGCTAAAAGTGGGACAGGCAAAAAAGCTGCATTTTGCATTCCTACATTGGAAAAAATTGACCAGGATAATAATGTTATTCAAGATATACAGGTCGGTCGCTCAGGGTGGTTTGGGCATTTTGGTTTAGCAGTTAACTTGATCACCTATTGGGACCACTTTAATTTGATTGAACAAGAATTAGGAATTGAAATAAAGCAAATTCCACCATATATTGACCAGATTATTCGTGAAGTGTATTGTGGAGCTTTCCATTTGGTTCCTTTATCCGATGAAGGCCTTGTACAAGCTTTGGGTGATTCAATGACATTTCTTAATTCGCTTCCTAGAAATTCATTTTTGTTTATGTTTGTAAATTTCATGTACACTGTCGTTGCATGTTACCTCACTAGGAATTCTCTATACTCTGACATAGAGAGTTCCATATTTTCTTGTCTTCTGTCTGTTTATGAGCAGGAACAGGGACAAGGAACCTCTGTTAGACTTTGA 1161 0.3704 MGKPLKDLTATKRKEFEDYFLMRELLMGIYEKVFERPSPIQEESIPIALTGSDILEMAKSGTGKKAAFCIPTLEKIDQDNNVDKLLSPEVQPSIVVINFYFPKNLETYLHRVGRSGWFGHIGLAVNLITYCDHFNLIEQEFGIKIKQIPPYIDQIIREVYCGAFHLVPLSDEGLDLTATKRKEFEDYFLMRELLMGIYEKVFERPSPIQEESIPIALTGSDILERAKSGTGKKAAFCIPTLEKIDQDNNVIQDIQVGRSGWFGHFGLAVNLITYWDHFNLIEQELGIEIKQIPPYIDQIIREVYCGAFHLVPLSDEGLVQALGDSMTFLNSLPRNSFLFMFVNFMYTVVACYLTRNSLYSDIESSIFSCLLSVYEQEQGQGTSVRL 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02027 386 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 175 252 - -
Arst1g02027 386 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 87 IPR027417 -
Arst1g02027 386 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 84 153 IPR027417 -
Arst1g02027 386 Gene3D - 182 257 IPR027417 -
Arst1g02027 386 Gene3D - 93 160 IPR027417 -
Arst1g02027 386 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 14 42 IPR014014 GO:0003724
Arst1g02027 386 Pfam DEAD/DEAH box helicase 39 79 IPR011545 GO:0003676|GO:0005524
Arst1g02027 386 Gene3D - 10 92 IPR027417 -
Arst1g02027 386 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 182 210 IPR014014 GO:0003724
Arst1g02027 386 Pfam DEAD/DEAH box helicase 207 246 IPR011545 GO:0003676|GO:0005524
Arst1g02027 386 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 248 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02027 Arst-Chr1 44898867 44977935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g02027 16 77 Eukaryotic Initiation Factors Gene Family AT5G11200 46.774 2.03e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02027 K12614 - adu:110280226 779.63