Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01987 ATGGTGGCAACTATGGCTGAGGATGGCGGAGGTGGGCGGTGGTGGCTGTTCCTCCATTCCGGCGTAGCAGTTGAGCGAAGATGGAAGAGGAAGACGTCGATAAGAAAGTCAGAAAGGCAGCTTGTAGGCATGAACCCCAAGCATGTGATGTTGAAATGGGTGCGTCGTCTTGGGCCTGGAAGCTCTTTAAAGAACAGGTATGTTGCATTGGGCCTAAGCCCAATAGAGGTAGTACCGAAGGGACATATGGCAATTTATGTTGGAGAATGGGAGGGAGAGAAGCAACGAGTTTTGGTGCCCGTTACACACTTGAACCACCCTTTGCTTGGGAAGCTTCTAGAGAAGGCAGAGAAAGTGTATGGGTTTGATCATCCAGGTGTAATAACCATACCTTGTGGAATATCAGAGTTCCAGAAAGTTCAGCAGAATATTTACTCGGCACAACGACTCCAAAGGCGACGCCAAATATGTTGCTCTATCTATATCTATAATACCAAATACTAA 504 0.4722 MVATMAEDGGGGRWWLFLHSGVAVERRWKRKTSIRKSERQLVGMNPKHVMLKWVRRLGPGSSLKNRYVALGLSPIEVVPKGHMAIYVGEWEGEKQRVLVPVTHLNHPLLGKLLEKAEKVYGFDHPGVITIPCGISEFQKVQQNIYSAQRLQRRRQICCSIYIYNTKY 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01987 167 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 52 139 IPR003676 GO:0009733
Arst1g01987 167 Pfam Auxin responsive protein 75 140 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01987 Arst-Chr1 42533857 42535743 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01987 74 138 Calmodulin-binding Proteins AT3G43120 49.231 1.35e-15 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01987 K14488 - gmx:102668727 152.14