Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01986 ATGAACACCTTCTCCCACGTACCTCCAGGCTTTCGTTTTCATCCGACTGATGAAGAATTAGTTGACTACTACCTTAGGAAAAAGGTAGCATCCAAAAAGATTGATCTAGATGTCATCAAAGACGTTGATCTCTATAAAATTGAGCCATGGGATCTTCAAGAACTATGCAAAATAGGAAGCGATGAAGAAAATGACTGGTATTTCTTCAGTCATAAAGATAAGAAGTACCCAACAGGAACAAGAACGAATAGGGCAACAAAAGCAGGGTTTTGGAAAGCCACGGGAAGAGATAAAGCAATATACTCAAAGCAGCATTGCCTTATTGGAATGAGAAAGACTCTTGTCTTCTACAAAGGAAGAGCTCCTAATGGCCACAAGTCTGATTGGATCATGCATGAGTATCGCCTTGAAACCAATGATTCACAACTGCAACAGGAAGAAGGGTGGGTTGTATGTAGAGTGTTCAAGAAGAAAATGGCAACAGTGAGGAAAATTGGAGACTATGATTCACCATGTTCTTGGTACGATGAACAAGTTCCCTTCATGCAAGATCTTGAATCTTCATCCCCAATAAAGCCACCAATAATTAACAACAACCATTATGCTTCTTCATACAACCATCACCAGTTACAATTACCCTGCAAACCGGAATTCCATCAACCAATGCAATACAACAACATGAACATGCCACGTCACGACGACGCTGCTGATAATAACAACAACTTCCTCCAACTTCCTCAGCTTGAAAGCCCTAATGCTGGAATTAGCCCCTTCTTGCAACAACAAGATCCTCATCAGCTATTGCAACAACAAAATTCCAACAACAGCAATTATCATCTTGATCAAGTAACCGATTGGCGAGTTCTCGATAAATTCGTTGCGTCGCAGCTCATGAGTCATGGTGATGATGATGGCCACAACCACAATAATAATGTTTCCAAAGAAGTAATAAACAGTTATTCTGATGCTTCAATTCTCCATGTGGCTCAACAGATTGCTATGCTGGCAAATGGATCGTCATCTTCATCATCATCAAGGAGGCCTCAAATTTCTCATCAGGAATATGCTGCTTCAACTTCCACATCAAGTTCTCAGATTGATCTCTGGAAGTCATCATCATGA 1122 0.4064 MNTFSHVPPGFRFHPTDEELVDYYLRKKVASKKIDLDVIKDVDLYKIEPWDLQELCKIGSDEENDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSKQHCLIGMRKTLVFYKGRAPNGHKSDWIMHEYRLETNDSQLQQEEGWVVCRVFKKKMATVRKIGDYDSPCSWYDEQVPFMQDLESSSPIKPPIINNNHYASSYNHHQLQLPCKPEFHQPMQYNNMNMPRHDDAADNNNNFLQLPQLESPNAGISPFLQQQDPHQLLQQQNSNNSNYHLDQVTDWRVLDKFVASQLMSHGDDDGHNHNNNVSKEVINSYSDASILHVAQQIAMLANGSSSSSSSRRPQISHQEYAASTSTSSSQIDLWKSSS 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01986 373 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 272 - -
Arst1g01986 373 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
Arst1g01986 373 MobiDBLite consensus disorder prediction 228 247 - -
Arst1g01986 373 Pfam No apical meristem (NAM) protein 8 136 IPR003441 GO:0003677|GO:0006355
Arst1g01986 373 FunFam NAC domain-containing protein 16 161 - -
Arst1g01986 373 MobiDBLite consensus disorder prediction 338 373 - -
Arst1g01986 373 Gene3D NAC domain 16 161 IPR036093 GO:0003677|GO:0006355
Arst1g01986 373 SUPERFAMILY NAC domain 5 157 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01986 Arst-Chr1 42470193 42475394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01986 1 368 NAC Transcription Factor Family AT1G62700 54.657 7.60e-128 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst1g01986 NAM 3.4e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01986 - - aip:107606832 699.508