Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01874 ATGACGCGACGATGCTCCCATTGCAGCCACAATGGGCATAACTCGAGGACCTGCCCGAACCGCGGCGTCAAGCTTTTTGTACGCCGGTTCCGGGTCCGGTTCAGGACCTATCCACGCTTCTGGGTCCAATAACCCCGGTTCGCCCGGGGATAACCACGATAACGCGGCTACCGCTGACGGTTATGCTTCCGAGGACTTCGTTCCTGGCTCCTCTTCTAGCTCCCGTGAAAGAAAGAAGGGGGTTCCATGGACTGAGGAGGAACATAGAATGTTTTTACTTGGATTACAAAAGTTGGGCAAAGGTGATTGGCGTGGAATTGCAAGGAACTATGTTATATCAAGGACCCCTACTCAAGTGGCCAGTCACGCTCAAAAGTATTTCATCAGGCAAAGCAATGTGTCTAGACGGAAAAGACGCTCCAGCTTGTTTGACATTGTTGCAGATGAAGCAGCTGATGATACTCCAATGGTACAGCAAGACTTCTTGTCAGCTAACCAGTTACAGGCTGAAACAGAAGGCAGTAACCCCTTGCCTGCGGTTCCCACCCTCGACGAAGAGTGTGAATCCATGGATTCCACCAACTCCAATGATGGAGATTCTGTGCCATTAAAGCCTGAAAACTCTCAACCACCACAACAGCAGTCATCTTATCCGGTGCTATATCCTGCATACTATTCTCCTTTCTTCCCATTTCCTCTGCCCTATTGGTCAGGGTACAGTCCAGAGCCTAATACTGTGAAGGAGGAGACACACGAGGTACTGAAGCCAACTGCAGTGCATTCCAAAGCACCAATCAACGTTGACGAACTCGTTGGCATGTCAAAACTGAGCTTGGGAGAGACTATTGCAGACTCAGGCCCGTCCTCTCTGTCCCTGAAGCTTCAAGAAGAAGGGCCATCTCGGCAGTCAGCGTTTCATGCAACCCCAACATGTGGCAGTTCGAATATGAATGAGAGTGCCATCCATGCAGTTTGA 976 0.5031 MTRRCSHCSHNGHNSRTCPNRGVKLFGVRLTDGSIRKSASMGNLTHYAGSGSGSGPIHASGSNNPGSPGDNHDNAATADGYASEDFVPGSSSSSRERKKGVPWTEEEHRMFLLGLQKLGKGDWRGIARNYVISRTPTQVASHAQKYFIRQSNVSRRKRRSSLFDIVADEAADDTPMVQQDFLSANQLQAETEGSNPLPAVPTLDEECESMDSTNSNDGDSVPLKPENSQPPQQQSSYPVLYPAYYSPFFPFPLPYWSGYSPEPNTVKEETHEVLKPTAVHSKAPINVDELVGMSKLSLGETIADSGPSSLSLKLQEEGPSRQSAFHATPTCGSSNMNESAIHAV 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01874 344 MobiDBLite consensus disorder prediction 207 236 - -
Arst1g01874 344 MobiDBLite consensus disorder prediction 46 104 - -
Arst1g01874 344 SUPERFAMILY Homeodomain-like 97 152 IPR009057 -
Arst1g01874 344 CDD SANT 102 147 IPR001005 -
Arst1g01874 344 SMART sant 99 149 IPR001005 -
Arst1g01874 344 NCBIfam myb-like DNA-binding domain, SHAQKYF class 98 150 IPR006447 GO:0003677
Arst1g01874 344 PANTHER TRANSCRIPTION FACTOR KUA1 3 282 - -
Arst1g01874 344 MobiDBLite consensus disorder prediction 1 21 - -
Arst1g01874 344 MobiDBLite consensus disorder prediction 322 344 - -
Arst1g01874 344 ProSiteProfiles Myb-like domain profile. 95 147 IPR001005 -
Arst1g01874 344 MobiDBLite consensus disorder prediction 188 236 - -
Arst1g01874 344 Gene3D - 101 153 - -
Arst1g01874 344 FunFam transcription factor MYB1R1 101 152 - -
Arst1g01874 344 Pfam Myb-like DNA-binding domain 102 147 IPR001005 -
Arst1g01874 344 ProSiteProfiles SANT domain profile. 103 151 IPR017884 -
Arst1g01874 344 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 95 151 IPR017930 -
Arst1g01874 344 MobiDBLite consensus disorder prediction 46 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01874 Arst-Chr1 35938113 35943281 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Arst1g01874 Myb_DNA-binding 1.2e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01874 - - ccaj:109807943 576.244