Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01831 ATGGAGCTTAAGCACCAACTTGGTCTTCTTTGCGTTATACTGCTTTTACCAGCACTAAGCAGTGCCACTAATAAAGACTACTGCCCTTGGAATCCTTATAAGAACTCTAGAGCAACCTATTATGGTACCCGTGATGGTTATGGGACTCCAAAATACATACATACATACATATATATAAGGACGGTGAATGATGGCATGGTTGCAGCTGTATCTGGGCTATGGAATGATGGAGTTGGCTGCGGTGCATGCTATCAGGTTAAATGTAAAGTACCAAAATTATGCAATGTCAACGGGGTAACAGTGGTGGCAACAGATTATGGTCAGGGAGACAGAACAGACTTCATATTGAGCCCACGGGCCTTTAATAGTTTGGGTGTGAGCCCTGATGCATCTAAAGAGCTAAAAAAATACGGTACTCTTGATATTGCATACAAAAGAGTCCCTTGCACATACCCTGGCCGCAACATTGTTGTTAAGGTTCAAGAAAGTAGCAGCAACCCTGGATACTTTGCTGTGGTTCTTCAAAACCTTGGTGGATCATACGATGTCACTAATGTTGAATTGTGGGAGGATTCACGCAAACAATGGAGTCCATTGCGTAGGGTTTATGGGGCAGTGTTTGACTATGCTAACCCACCAAAGGGTCAACTCTTCTTGAGGTTCCAAGTGATTGGTTGTTATGGAACTTATTGGCAAATACCAAAGAAACCTATCCCTGCTGATTGGAAGCCCAAAATTACTTATGACACTGGACTTCAGCTTAAATAA 768 0.4258 MELKHQLGLLCVILLLPALSSATNKDYCPWNPYKNSRATYYGTRDGYGTPKYIHTYIYIRTVNDGMVAAVSGLWNDGVGCGACYQVKCKVPKLCNVNGVTVVATDYGQGDRTDFILSPRAFNSLGVSPDASKELKKYGTLDIAYKRVPCTYPGRNIVVKVQESSSNPGYFAVVLQNLGGSYDVTNVELWEDSRKQWSPLRRVYGAVFDYANPPKGQLFLRFQVIGCYGTYWQIPKKPIPADWKPKITYDTGLQLK 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01831 255 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 168 250 IPR007117 -
Arst1g01831 255 Gene3D - 150 250 IPR036749 -
Arst1g01831 255 PRINTS Expansin/Lol pI family signature 137 153 IPR007118 GO:0005576
Arst1g01831 255 PRINTS Expansin/Lol pI family signature 32 47 IPR007118 GO:0005576
Arst1g01831 255 PRINTS Expansin/Lol pI family signature 236 250 IPR007118 GO:0005576
Arst1g01831 255 PRINTS Expansin/Lol pI family signature 70 88 IPR007118 GO:0005576
Arst1g01831 255 SUPERFAMILY Barwin-like endoglucanases 27 153 IPR036908 -
Arst1g01831 255 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 42 154 IPR007112 -
Arst1g01831 255 Pfam Lytic transglycolase 71 136 IPR009009 -
Arst1g01831 255 PANTHER EXPANSIN-B3 16 253 - -
Arst1g01831 255 Pfam Expansin C-terminal domain 156 226 IPR007117 -
Arst1g01831 255 SUPERFAMILY PHL pollen allergen 154 249 IPR036749 -
Arst1g01831 255 Gene3D - 16 149 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01831 Arst-Chr1 34368870 34371763 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01831 1 254 Expansin Gene Family AT4G17030 45.349 5.27e-71 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01831 - - ahf:112802200 359.762