Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01791 ATGAATGTGCTTCACCTCTTTAGCAAGGCCTCAGAATTGAAGGTGAATGTGGATAAATCAAAGGCTTTTTGCTCCAGAGGGGGAGCTTGTGGCTTTGGAGAATATGGAAGGACAGTCAATGATGGCAGTGTTGCAGCGGTGTCTAGGCTATGGAGGAATGGAACTGGCTGTGGTGCATGCTACCAGGCAAGGTGCAAATTAGAGCAATACTGCGACGAGGAGGGAACCTACGTGGTGGTAACAGACTACGGCGAAGGAGACAGAACAGACTTCGTTTTGAGCCCACGCGCCTACAAGAAGTTGGGACGAAACGATAAAGCTGCAGCAGAGCTATTCAAATATGGTGTGGTTGACATTGAATACCGAAGGGTCCCTTGCAGATATGAAGGCTACAACATTGTCTTTAAGGTCCATGAACGAAGCAAGAATCCTGAATACTTTGCTGTTGTCATTCTCTATGTTAATGGTGCTTATGATGTAACTGCTGTTCAGTTGTGGCAGGAAGATTGCCAAGAATGGACAGAAATGAGGAGGGTTTATGGGGCAGTGTTTGATTATGCCAATCCACCAAGTGGTGAAATCAATTTGAGGTTCCAAGTGAGTGGCAGTGCAGGTATCTATTGGGTGCAATCCCAGAATGCTATTCCTAGTGATTGGACTGCTGGAGCTGCTTATGATTCACAGGTTCAGCTTACTTAA 699 0.4607 MNVLHLFSKASELKVNVDKSKAFCSRGGACGFGEYGRTVNDGSVAAVSRLWRNGTGCGACYQARCKLEQYCDEEGTYVVVTDYGEGDRTDFVLSPRAYKKLGRNDKAAAELFKYGVVDIEYRRVPCRYEGYNIVFKVHERSKNPEYFAVVILYVNGAYDVTAVQLWQEDCQEWTEMRRVYGAVFDYANPPSGEINLRFQVSGSAGIYWVQSQNAIPSDWTAGAAYDSQVQLT 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01791 232 PANTHER EXPANSIN-B3 21 230 - -
Arst1g01791 232 SUPERFAMILY Barwin-like endoglucanases 25 130 IPR036908 -
Arst1g01791 232 Pfam Lytic transglycolase 45 121 IPR009009 -
Arst1g01791 232 Pfam Expansin C-terminal domain 133 216 IPR007117 -
Arst1g01791 232 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 27 131 IPR007112 -
Arst1g01791 232 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 145 227 IPR007117 -
Arst1g01791 232 PRINTS Expansin/Lol pI family signature 114 130 IPR007118 GO:0005576
Arst1g01791 232 PRINTS Expansin/Lol pI family signature 213 227 IPR007118 GO:0005576
Arst1g01791 232 PRINTS Expansin/Lol pI family signature 26 44 IPR007118 GO:0005576
Arst1g01791 232 PRINTS Expansin/Lol pI family signature 173 187 IPR007118 GO:0005576
Arst1g01791 232 Gene3D - 11 126 IPR036908 -
Arst1g01791 232 Gene3D - 127 228 IPR036749 -
Arst1g01791 232 SUPERFAMILY PHL pollen allergen 132 227 IPR036749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01791 Arst-Chr1 33464436 33468849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01791 28 232 Expansin Gene Family AT4G17030 61.165 3.67e-98 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01791 - - aip:107617746 424.476