Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01778 ATGTCGGGGCAAACACAGCGTCTGAATGTTGTCCCCACGGTGACGATGCTGGGAGTGGTGAAGGCTCGTTTGGTTGGAGCCACACGTGGTCACGCTCTCCTAAAGAAGAAGAGTGATGCACTTACTGTGCAGTTCAGGCAGATCCTGAAGAAGATTGTGTCTACCAAGGAATCAATGGGTGACATCATGAAGACCTCTTCTTTTGCACTGACCGAGGCAAAGTACGTTGCTGGTGACAACATCAAGCATGTTGTGCTCGAGAATGTTCGAGAGGCCTCCCTCAAGGTCCGGTCCCGGCAGGAGAATGTTGCTGGCGTTAAGCTTCCCAAGTTCGAGTACACCAATGACGGCGAGGTTAACAAGAATGACCTCACTGGATTGGCCCGGGGTGGACAGCAGGTGCAGCAGTGCCGAGCTGCTTACATCAAGGCAATTGAGGTCCTTGTGGAGCTTGCCTCTCTTCAGACATCCTTCCTCACACTTGACGAGGCAATCAAGACTACAAATCGGAGGGTTAATGCCCTTGAGAATGTGGTGAAGCCTAGGTTGGAGAATACCATTAGTTATATTAAGGGAGAGTTGGATGAGCTAGAAAGGGAGGATTTCTTTAGGTTGAAGAAGATCCAAGGATATAAGAAGAGGGAAATCGAGAAGCAGATGCAATCTGCCAAGATGTTCGCTGAGGAACAGGTTGCTGAGAAGCTTGCATTGCAAAGAGGTATTTCGCTGAATAATGCTCAAAACATGTTGTCTGCAGCGGCACAGAAAGATGAGGATATCATTTTCTGA 789 0.488 MSGQTQRLNVVPTVTMLGVVKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMGDIMKTSSFALTEAKYVAGDNIKHVVLENVREASLKVRSRQENVAGVKLPKFEYTNDGEVNKNDLTGLARGGQQVQQCRAAYIKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLENTISYIKGELDELEREDFFRLKKIQGYKKREIEKQMQSAKMFAEEQVAEKLALQRGISLNNAQNMLSAAAQKDEDIIF 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01778 262 NCBIfam V-type ATP synthase subunit D 9 213 IPR002699 GO:0046961
Arst1g01778 262 Gene3D - 1 199 - -
Arst1g01778 262 PANTHER V-TYPE ATP SYNTHASE SUBUNIT D 1 262 IPR002699 GO:0046961
Arst1g01778 262 Pfam ATP synthase subunit D 18 209 IPR002699 GO:0046961
Arst1g01778 262 FunFam V-type proton ATPase subunit D 1 199 - -
Arst1g01778 262 Coils Coil 180 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01778 Arst-Chr1 33078923 33083487 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01778 1 262 Primary Pumps ATPases(2) AT3G58730 81.298 1.10e-158 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01778 K02149 - tcc:18612121 450.669