LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst1g01778	ATGTCGGGGCAAACACAGCGTCTGAATGTTGTCCCCACGGTGACGATGCTGGGAGTGGTGAAGGCTCGTTTGGTTGGAGCCACACGTGGTCACGCTCTCCTAAAGAAGAAGAGTGATGCACTTACTGTGCAGTTCAGGCAGATCCTGAAGAAGATTGTGTCTACCAAGGAATCAATGGGTGACATCATGAAGACCTCTTCTTTTGCACTGACCGAGGCAAAGTACGTTGCTGGTGACAACATCAAGCATGTTGTGCTCGAGAATGTTCGAGAGGCCTCCCTCAAGGTCCGGTCCCGGCAGGAGAATGTTGCTGGCGTTAAGCTTCCCAAGTTCGAGTACACCAATGACGGCGAGGTTAACAAGAATGACCTCACTGGATTGGCCCGGGGTGGACAGCAGGTGCAGCAGTGCCGAGCTGCTTACATCAAGGCAATTGAGGTCCTTGTGGAGCTTGCCTCTCTTCAGACATCCTTCCTCACACTTGACGAGGCAATCAAGACTACAAATCGGAGGGTTAATGCCCTTGAGAATGTGGTGAAGCCTAGGTTGGAGAATACCATTAGTTATATTAAGGGAGAGTTGGATGAGCTAGAAAGGGAGGATTTCTTTAGGTTGAAGAAGATCCAAGGATATAAGAAGAGGGAAATCGAGAAGCAGATGCAATCTGCCAAGATGTTCGCTGAGGAACAGGTTGCTGAGAAGCTTGCATTGCAAAGAGGTATTTCGCTGAATAATGCTCAAAACATGTTGTCTGCAGCGGCACAGAAAGATGAGGATATCATTTTCTGA	789	0.488	MSGQTQRLNVVPTVTMLGVVKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMGDIMKTSSFALTEAKYVAGDNIKHVVLENVREASLKVRSRQENVAGVKLPKFEYTNDGEVNKNDLTGLARGGQQVQQCRAAYIKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLENTISYIKGELDELEREDFFRLKKIQGYKKREIEKQMQSAKMFAEEQVAEKLALQRGISLNNAQNMLSAAAQKDEDIIF	262

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst1g01778	262	NCBIfam	V-type ATP synthase subunit D	9	213	IPR002699	GO:0046961
	Arst1g01778	262	Gene3D	-	1	199	-	-
	Arst1g01778	262	PANTHER	V-TYPE ATP SYNTHASE SUBUNIT D	1	262	IPR002699	GO:0046961
	Arst1g01778	262	Pfam	ATP synthase subunit D	18	209	IPR002699	GO:0046961
	Arst1g01778	262	FunFam	V-type proton ATPase subunit D	1	199	-	-
	Arst1g01778	262	Coils	Coil	180	200	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst1g01778	Arst-Chr1	33078923	33083487	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst1g01778	1	262	Primary Pumps ATPases(2)	AT3G58730	81.298	1.10e-158	439

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst1g01778	K02149		-	tcc:18612121	450.669

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