Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01687 ATGCATAGCGTTGAGTTCCTTCACAAACCTCTCTCCGAGGACAAGCTTCGAAATATATGGCAGCATGTGGTTCACAAGGCATTCAATGCTAGTGCAAGTGTTATGTCCGAATCGCTAAAACCGGTCAAAGAATCTGTAGTATCCATGTTGCAGCTCCAAACAGACAATGAACAACAAGAAAGTACATATACTGATGATGATCCTGATCCTGGAAGCGATAAGTATCCGGCTCCATCGACCCCCCAATTGAATCAGGGATTGAGATTGATGGACGATGGCGATTGTCCAGAGCAGACTAATTGCTCAATAGAAAAGGAGAGTGGGGAACATGATGGAGAAGGAGAATCGAAATCCGTCGAAACTACATGTGAAAATTTGAATTCTGAAAGTAATAATCCTAATGAACCAATGAACACTGAAAAGACTTTGGTCAAGAATTTAGCGGAAGGTTCTAGAGATGGGAACCATGATAGTTCTGTTTATAAGCATACAAATGATAAGGTTCTTAGCAGCGATGATGGTAATACAAAATCTTCAAATAAAGTGGATTCATGCACGTTGAAAGCTCATCGGAAGAAGATGAAAATAGACTGGACACCCGAGCTGCACAAAAAATTTGTGAAAGCGGTGGAACAACTAGGCCTTGACCAAGCTATTCCATCTCGAATATTGGATCTAATGAAAGTGGAGGGACTGACAAGGCATAATGTTGCAAGCCATCTTCAGAAATATAGAATGCATAAGAGACAAATATTGCCCAAGGAAGAAGGTAGGAAATGGCTAAATCAAAGGGATCAAATGCAAAGGAGCTATTGTCTTCAACAACGACCAATAATGGCGTTTCCACCACCGAATCATTCCAATCACACCCTTTCGCCAGCTCCTGTGTATCCAGTGTGGAGGCAATCCGGCGGCCAAGCAGCAGCTATGCCGGTTTGGGGCCCTCCTGGTTATCCTCTCTGGCATCCTACAGAAAGTTGGCACTGGAAGCCGCTTCCCGGGTTGCAGATGCATGCGGATGCATGGGGATGCCCGGTTCTGCCACCTCCTCAGGCTCCTCTTCCTTGCTTTTCCTACCCTTTGAATGTTCCCGGCATGCACCATACTAGTGCTGTGGATTACAAGTCTATCATGCCACAGAGTTCCCTTGATCTTCATCTGGCCGAGGAGGTTGTTGACAAGGTAGTGAAAGAAGCAATAAGCAAGCCATGGCTACCATTACCCTTAGGCCTGAAGCCTCCTTCCACAGATAGTGTGCTGGCCGAGCTTTCGCGAAAAGGCATATCGACCATCCCTCCATGTAGCAAGGGGTCCTAA 1317 0.4563 MHSVEFLHKPLSEDKLRNIWQHVVHKAFNASASVMSESLKPVKESVVSMLQLQTDNEQQESTYTDDDPDPGSDKYPAPSTPQLNQGLRLMDDGDCPEQTNCSIEKESGEHDGEGESKSVETTCENLNSESNNPNEPMNTEKTLVKNLAEGSRDGNHDSSVYKHTNDKVLSSDDGNTKSSNKVDSCTLKAHRKKMKIDWTPELHKKFVKAVEQLGLDQAIPSRILDLMKVEGLTRHNVASHLQKYRMHKRQILPKEEGRKWLNQRDQMQRSYCLQQRPIMAFPPPNHSNHTLSPAPVYPVWRQSGGQAAAMPVWGPPGYPLWHPTESWHWKPLPGLQMHADAWGCPVLPPPQAPLPCFSYPLNVPGMHHTSAVDYKSIMPQSSLDLHLAEEVVDKVVKEAISKPWLPLPLGLKPPSTDSVLAELSRKGISTIPPCSKGS 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01687 438 MobiDBLite consensus disorder prediction 53 181 - -
Arst1g01687 438 Pfam Myb-like DNA-binding domain 198 245 IPR001005 -
Arst1g01687 438 MobiDBLite consensus disorder prediction 103 118 - -
Arst1g01687 438 Gene3D - 189 251 - -
Arst1g01687 438 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 190 249 IPR017930 -
Arst1g01687 438 PANTHER TRANSCRIPTION ACTIVATOR GLK1 11 434 IPR044825 GO:0003700|GO:0045893
Arst1g01687 438 MobiDBLite consensus disorder prediction 119 145 - -
Arst1g01687 438 SUPERFAMILY Homeodomain-like 191 250 IPR009057 -
Arst1g01687 438 MobiDBLite consensus disorder prediction 146 170 - -
Arst1g01687 438 NCBIfam myb-like DNA-binding domain, SHAQKYF class 193 248 IPR006447 GO:0003677
Arst1g01687 438 FunFam Two-component response regulator 189 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01687 Arst-Chr1 29193572 29198464 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01687 1 435 Response Regulator Gene Family AT4G18020 45.652 2.01e-90 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Arst1g01687 Myb_DNA-binding 4.1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01687 - - gmx:100784905 541.191