Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01684 ATGGTTTGCACTGTCAATGATTTACAACAATGGAAGGATTTCCCAAAGGGACTCAAGGTTCTTCTCCTTGAAGGAGACGCCACTTCCGCGGCCGAGATAAAACCAAAGCTTGAAGCCATGGACTATAATGTTTCTGCTTTCTGCGACGAGAATGAAGCCTTATCAGCGATCTCAAGTAGATCCGAAAGCTTCCACATTGCCATAGTGGAGGTGAGTATAAACAGCGGCCAAGGAGGTTTCAAATTTCTTGAGAATGCCAAGGATTTGCCAACCATTATGACTTCAAACGATCATTGCCTGAGCACCATGATGAAATGCATAGCGCTCGGTGCAGTTGAGTTCCTTCACAAACCTCTCTCCGAGGACAAGCTTCGAAATATATGGCAGCATGTGGTTCACAAGGCATTCAATGCTAGTGCAAGTGTTATGTCCGAATCGCTAAAACCGGTCAAAGAATCTGTAGTATCCATGTTGCAGCTCCAAACAGACAATGAACAACAAGAAAGTACATATACTGATGATGATCCTGATCCTGGAAGCGATAAGTATCCGGCTCCATCGACCCCCCAATTGAATCAGGGATTGAGATTGATGGACGATGGCGATTGTCCAGAGCAGACTAATTGCTCAATAGAAAAGGAGAGTGGGGAACATGATGGAGAAGGAGAATCGAAATCCGTCGAAACTACATGTGAAAATTTGAATTCTGAAAGTAATAATCCTAATGAACCAATGAACACTGAAAAGACTTTGGTCAAGAATTTAGCGGAAGGTTCTAGAGATGGGAACCATGATAGTTCTGTTTATAAGCATACAAATGATAAGGTTCTTAGCAGCGATGATGGTAATACAAAATCTTCAAATAAAGTGGATTCATGCACGTTGAAAGCTCATCGGAAGAAGATGAAAATAGACTGGACACCCGAGCTGCACAAAAAATTTGTGAAAGCGGTGGAACAACTAGGCCTTGACCAAGCTATTCCATCTCGAATATTGGATCTAATGAAAGTGGAGGGACTGACAAGGCATAATGTTGCAAGCCATCTTCAGAAATATAGAATGCATAAGAGACAAATATTGCCCAAGGAAGAAGGTAGGAAATGGCTAAATCAAAGGGATCAAATGCAAAGGAGCTATTGTCTTCAACAACGACCAATAATGGCGTTTCCACCACCGAATCATTCCAATCACACCCTTTCGCCAGCTCCTGTGTATCCAGTGTGGAGGCAATCCGGCGGCCAAGCAGCAGCTATGCCGGTTTGGGGCCCTCCTGGTTATCCTCTCTGGCATCCTACAGAAAGTTGGCACTGGAAGCCGCTTCCCGGGATGCATGCGGATGCATGGGGATGCCCGGTTCTGCCACCTCCTCAGGCTCCTCTTCCTTGCTTTTCCTACCCTTTGAATGTTCCCGGCATGCACCATACTAGTGCTGTGGATTACAAGTCTATCATGCCACAGAGTTCCCTTGATCTTCATCTGGCCGAGGAGGTTGTTGACAAGGTAGTGAAAGAAGCAATAAGCAAGCCATGGCTACCATTACCCTTAGGCCTGAAGCCTCCTTCCACAGATAGTGTGCTGGCCGAGCTTTCGCGAAAAGGCATATCGACCATCCCTCCATGTAGCAAGGGGTCCTAA 1635 0.4557 MVCTVNDLQQWKDFPKGLKVLLLEGDATSAAEIKPKLEAMDYNVSAFCDENEALSAISSRSESFHIAIVEVSINSGQGGFKFLENAKDLPTIMTSNDHCLSTMMKCIALGAVEFLHKPLSEDKLRNIWQHVVHKAFNASASVMSESLKPVKESVVSMLQLQTDNEQQESTYTDDDPDPGSDKYPAPSTPQLNQGLRLMDDGDCPEQTNCSIEKESGEHDGEGESKSVETTCENLNSESNNPNEPMNTEKTLVKNLAEGSRDGNHDSSVYKHTNDKVLSSDDGNTKSSNKVDSCTLKAHRKKMKIDWTPELHKKFVKAVEQLGLDQAIPSRILDLMKVEGLTRHNVASHLQKYRMHKRQILPKEEGRKWLNQRDQMQRSYCLQQRPIMAFPPPNHSNHTLSPAPVYPVWRQSGGQAAAMPVWGPPGYPLWHPTESWHWKPLPGMHADAWGCPVLPPPQAPLPCFSYPLNVPGMHHTSAVDYKSIMPQSSLDLHLAEEVVDKVVKEAISKPWLPLPLGLKPPSTDSVLAELSRKGISTIPPCSKGS 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01684 544 ProSiteProfiles Response regulatory domain profile. 19 132 IPR001789 GO:0000160
Arst1g01684 544 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 298 357 IPR017930 -
Arst1g01684 544 MobiDBLite consensus disorder prediction 211 226 - -
Arst1g01684 544 FunFam Two-component response regulator 297 360 - -
Arst1g01684 544 MobiDBLite consensus disorder prediction 254 278 - -
Arst1g01684 544 Pfam Response regulator receiver domain 20 127 IPR001789 GO:0000160
Arst1g01684 544 Gene3D - 297 359 - -
Arst1g01684 544 NCBIfam myb-like DNA-binding domain, SHAQKYF class 301 356 IPR006447 GO:0003677
Arst1g01684 544 SUPERFAMILY CheY-like 16 135 IPR011006 -
Arst1g01684 544 SUPERFAMILY Homeodomain-like 299 358 IPR009057 -
Arst1g01684 544 Pfam Myb-like DNA-binding domain 306 353 IPR001005 -
Arst1g01684 544 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 540 IPR044825 GO:0003700|GO:0045893
Arst1g01684 544 Gene3D - 18 145 - -
Arst1g01684 544 MobiDBLite consensus disorder prediction 227 253 - -
Arst1g01684 544 FunFam Two-component response regulator-like APRR2 17 143 - -
Arst1g01684 544 SMART REC_2 18 128 IPR001789 GO:0000160
Arst1g01684 544 MobiDBLite consensus disorder prediction 161 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01684 Arst-Chr1 29193572 29200048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01684 1 541 Response Regulator Gene Family AT4G18020 49.303 6.38e-145 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Arst1g01684 Response_reg 5.6e-08 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01684 - - gmx:100784905 717.227