Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01658 ATGGGAGGGGCATCACTGCCACCTGGATTTCGTTTCCACCCAACGGATGAAGAATTATTGGGATATTACCTAAAAAGAAAAGTGGAAGGGCTTGAAATTGAGCTTGAGGTTATTCCTGTGATTGATTTGTGCAAGTTTGATCCTTGGGAATTGCCCGAGAAATCATTGTTGGCAAACAGAGACATGGAATGGTTCTTCTTTTGTCCAAGGGACCGCAAGTACCCAAATGGATCAAGAACTAACAGAGCCACCAAAGCTGGTTATTGGAAAGCCACTGGAAAAGACAAGAAAGTTGTGTGCCAATTTGATACTCCTTCCACTGTCACAGGATATAGAAAAACCCTTGTCTTCTACCGTGGCAGAGCCCCTTTAGGTGACAGAACTGATTGGCTCATGCATGAGTATCACCTCGCCGATGATCTCGGCCTAGCATCTACATGTTTTCAGGGTGGTTATGCCTTGTGTCGGGTTATTAAGAAGAATGAGAAGGTGAACAATGGGAATGATGCGTCAATGAGATTCTCCAATGAGCCCTTCTCCATTTCTGCTGATGCTTCATCTTCTCAACCAAGTTATTTGAACAGTGAGAGTGTTTACTCAAGCCCCAATGCTTCTTCACACAATGTGGCTCCAATGGCAGACTCTAACCAAGCTTCTATAAACACCAGTTCTTCATCAGAATTTTGGGTGTCCCCTGATCTGATTCTTGATTCTTCAAAGGACTACCCGCAACTAGAAAATACTTTTACAAGGTGTGACATACCAAGTAGTACAATGACACCATGCCTCTCATTGGATCAACCTGAAATTTCACCTTGTTCATCATACTCAAATTTTAATGGGCAACTTGGATTTTCCGATGATTTCAATATGATTGGCGGCATGTCACCTTACTCAATACAAGAAGATTTTATGTACTTTCATGGAAATGATGGGGATGTTTCTTATGGAAGTTATGATCATATTAATTCAGTTGAGTACCCTGAATACTTCTGA 996 0.4177 MGGASLPPGFRFHPTDEELLGYYLKRKVEGLEIELEVIPVIDLCKFDPWELPEKSLLANRDMEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDKKVVCQFDTPSTVTGYRKTLVFYRGRAPLGDRTDWLMHEYHLADDLGLASTCFQGGYALCRVIKKNEKVNNGNDASMRFSNEPFSISADASSSQPSYLNSESVYSSPNASSHNVAPMADSNQASINTSSSSEFWVSPDLILDSSKDYPQLENTFTRCDIPSSTMTPCLSLDQPEISPCSSYSNFNGQLGFSDDFNMIGGMSPYSIQEDFMYFHGNDGDVSYGSYDHINSVEYPEYF 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01658 331 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 214 - -
Arst1g01658 331 SUPERFAMILY NAC domain 4 160 IPR036093 GO:0003677|GO:0006355
Arst1g01658 331 Gene3D NAC domain 15 165 IPR036093 GO:0003677|GO:0006355
Arst1g01658 331 ProSiteProfiles NAC domain profile. 6 160 IPR003441 GO:0003677|GO:0006355
Arst1g01658 331 FunFam Nac domain-containing protein 86 15 163 - -
Arst1g01658 331 Pfam No apical meristem (NAM) protein 7 137 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01658 Arst-Chr1 28139546 28142272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01658 1 252 NAC Transcription Factor Family AT4G17980 58.268 1.83e-98 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst1g01658 NAM 3.3e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01658 - - aip:107605232 539.265