Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01636 ATGCCAGTTCCACTTGCTCCTTATCCAACACCACCGGCTCCACATACTCCTCCATCCGCAAATGCAGGTCAACAGAGTCAACTTGTGTGTTCTGGCTGTAGAAACCTTTTGCTCTATCCGGTTGGAGCCTCCTCTGTTTGCTGTGCTGTTTGCAATGCAGTCACCGCCGTGCCGCCTCCCGGAACGGAAATGGCCCAGTTAATCTGTGGAGGCTGCCATACATTACTAATGTACATCCGTGGCGCAACAAGTGTCCAATGCTCATGCTGTCACACTGTGAATCTAGCCATGGAAGCAAATCAGGTGGCACATGTCAATTGTGGCAGCTGCAGGATGCTACTGATGTACCAATATGGAGCAACATCTGTTAAATGTGCAGTTTGCAATTTTGTAACTTCAATTGGGGCATCAACAAGCATCACAGAGCAGAAGTTCAGCAACTAA 444 0.4865 MPVPLAPYPTPPAPHTPPSANAGQQSQLVCSGCRNLLLYPVGASSVCCAVCNAVTAVPPPGTEMAQLICGGCHTLLMYIRGATSVQCSCCHTVNLAMEANQVAHVNCGSCRMLLMYQYGATSVKCAVCNFVTSIGASTSITEQKFSN 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01636 147 NCBIfam zinc finger domain, LSD1 subclass 27 57 IPR005735 -
Arst1g01636 147 NCBIfam zinc finger domain, LSD1 subclass 104 133 IPR005735 -
Arst1g01636 147 NCBIfam zinc finger domain, LSD1 subclass 66 95 IPR005735 -
Arst1g01636 147 MobiDBLite consensus disorder prediction 1 18 - -
Arst1g01636 147 SUPERFAMILY Multiheme cytochromes 30 128 IPR036280 -
Arst1g01636 147 MobiDBLite consensus disorder prediction 1 20 - -
Arst1g01636 147 PANTHER PROTEIN LSD1 25 136 IPR040319 -
Arst1g01636 147 Pfam LSD1 zinc finger 69 93 IPR005735 -
Arst1g01636 147 Pfam LSD1 zinc finger 30 54 IPR005735 -
Arst1g01636 147 Pfam LSD1 zinc finger 107 131 IPR005735 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01636 Arst-Chr1 27165604 27167883 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-LSD Arst1g01636 zf-LSD1 1.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01636 - - mnt:21406053 246.514